Probabilistic Analysis Check Package

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Documentation for package ‘pacheck’ version 0.2.2

• DESCRIPTION file.
• User guides, package vignettes and other documentation.
• Package NEWS.

Help Pages

calculate_ceac	Calculate cost-effectiveness probabilities for two strategies.
calculate_ceac_mult	Calculate cost-effectiveness probabilities.
calculate_nb	Calculate NMB and NHB for two strategies.
calculate_nb_mult	Calculate NMB and NHB.
check_binary	Check binary
check_mean_qol	Check mean quality of life
check_positive	Check whether variables are strictly positive
check_psa_darth	Check PSA inputs & outputs
check_range	Check range
check_sum_probs	Check sum probabilities
check_sum_vars	Check sum variables
check_surv_mod	Check parametric survival models
df_ckd_inputs	A dataframe containing probabilistic inputs for testing
df_ckd_results	A dataframe containing probabilistic outputs for testing
df_iviRA_pa	Dataframe of inputs and outputs of a health economic model developed and evaluated with the iviRA R package for testing
df_pa	Dataframe for testing
df_pa_psm	Dataframe for testing
do_check	Perform a check
do_discount_check	Perform discounted and undiscounted results check
do_quick_check	Perform quick checks of inputs and outputs
estimate_decision_sensitivity	Estimate decision sensitivy DSA using linear metamodel
fit_dist	Fit distribution to parameter
fit_lasso_metamodel	Fit LASSO metamodel
fit_lm_metamodel	Fit linear metamodel
fit_rf_metamodel	Fit random forest metamodel
generate_cor	Generate correlation matrix
generate_det_inputs	Generate deterministic model inputs.
generate_pa_inputs	Generate probabilistic model inputs.
generate_pa_inputs_psm	Generate probabilistic model inputs for partitioned survival model.
generate_sum_stats	Generate summary statistics
l_psa_aaa	A dataframe containing probabilistic inputs for testing
perform_dowsa	Perform deterministic one-way sensitivity analyses using probabilistic inputs and outputs.
perform_simulation	Perform the health economic simulation.
perform_simulation_psm	Perform the health economic simulation using partitioned survival model.
plot_ce	Plotting cost-effectiveness plane for two strategies.
plot_ceac	Plotting the cost-effectiveness acceptability curves.
plot_ce_mult	Plotting cost-effectiveness plane.
plot_convergence	Plot moving average
plot_ice	Plotting the incremental cost-effectiveness plane.
plot_nb	Plot (i)NMB or (i)NHB.
plot_nb_mult	Plot NMB or NHB.
plot_surv_mod	Plot parametric survival models
predict_metamodel	Predict using a fitted metamodel
summary_ice	Summary statistics of the incremental cost-effectiveness plane.
validate_metamodel	Validate metamodels
vis_1_param	Visualise the distribution of a single parameter
vis_2_params	Visualise the distribution of two parameters