# Generated by roxygen2: do not edit by hand

export(GRangesToString)
export(MotifEnrichment)
export(MotifSetEnrichmentAnalysis)
export(StringsToGRanges)
export(addAccessibilityShift)
export(addMotifSet)
export(annotateTiles)
export(bulkDimReduction)
export(bulkUMAP)
export(callOpenTiles)
export(combineSampleTileMatrix)
export(differentialsToGRanges)
export(exportCoverage)
export(exportDifferentials)
export(exportMotifs)
export(exportOpenTiles)
export(exportSmoothedInsertions)
export(extractRegion)
export(filterCoAccessibleLinks)
export(getAltTSS)
export(getCellPopMatrix)
export(getCellTypeTiles)
export(getCellTypes)
export(getCoAccessibleLinks)
export(getCoverage)
export(getDifferentialAccessibleTiles)
export(getModelValues)
export(getPopFrags)
export(getPromoterGenes)
export(getSampleCellTypeMetadata)
export(getSampleTileMatrix)
export(mergeTileResults)
export(packMOCHA)
export(pilotLMEM)
export(pilotZIGLMM)
export(plotConsensus)
export(plotIntensityDistribution)
export(plotRegion)
export(renameCellTypes)
export(runLMEM)
export(runZIGLMM)
export(subsetMOCHAObject)
export(testCoAccessibility)
export(testCoAccessibilityChromVar)
export(testCoAccessibilityRandom)
export(unpackMOCHA)
export(varZIGLMM)
import(data.table)
importFrom(magrittr,"%>%")
importFrom(rlang,.data)
