64722333a8bc112a0d3fcbf1b582257e *DESCRIPTION
ff7cc4c4859ab35985e317033f470400 *NAMESPACE
3fb7783e64e57f8acdd56b37c25429df *R/EHR-package.R
d6cebc07f95c2015b6efb40110755ab5 *R/Logistf.R
c1f66d421f8c9c393393fe8e467d2548 *R/addLastDose.R
2848fed451e5df16149bb9f7d6d9d7ed *R/analysisPheWAS.R
8056b5511894918242d7ce09ed558bfa *R/buildDose.R
f42dfc5222019c278810ddecb0cc85dc *R/collapseDose.R
68d2cf8240867a6bb1b06e86cbefde43 *R/dataTransformation.R
f5f25a7bf8efa4fa734f92a6437be0e4 *R/dd.R
4706afdeaed65af4a7bc37b412e01fa1 *R/dd.baseline.R
ca920095738088b18b7eeded75ba3745 *R/dd.baseline.small.R
7b955fceaf294cecb64812fd9aac64e2 *R/dd.small.R
c4a914d31f8881d0005b1499fb9d4ea7 *R/extractMed.R
d8c22d2266f1659b777e83dd7fab24cb *R/lamMetadata.R
c150c298853796ded3287063dd6fc93f *R/lamParseOutput.R
0c99c7055d87413038f5345ad084de65 *R/makeDose.R
96b784f167f7b46082c44ff73297322f *R/modDemo.R
ac2eb095983b5a709368337f28210337 *R/modDrugLevel.R
39472fb81c7b3ff29536d3e4573a3ae5 *R/modLabs.R
2b391f693cad473fbdf5ced7c2fb260c *R/modMedStr1.R
d9f68a25680a1c07fed022d2ab7e79d6 *R/modMedStr2.R
a0df4b745be6634864e22a8d6382c910 *R/modPK.R
016c4128029e4bd04e20e144a4a7eb4a *R/parseClamp.R
e39780fd059e61b4b1158ea8c2242318 *R/parseMedExtractR.R
6fb1fe11a42cb790d2e30b536ab9b216 *R/parseMedex.R
020cc0adf2a8774e5abbdca9ea5639ca *R/parseMedxn.R
98492624d76ee603cf9df030b9864ad1 *R/pkDosingInterval.R
73bb0a05eff0c2566c50479c6d25e36a *R/processLastDose.R
8807f20ea7afaf8ce57505a7654e6e5f *R/stdzDose.R
7445fcb39c2162aa606b9b90036f6e08 *R/stdzDoseChange.R
48eecb6f48407808cbdea3a25ef99a75 *R/stdzDoseSchedule.R
82eb909e9a021db8bbdbc0aa5ddbdbad *R/stdzDuration.R
051211ca9507ec34ca28be6421e8a1d3 *R/stdzFreq.R
10f53865c35ea634d93c0647c1619935 *R/stdzRoute.R
2528bfe09c9f79ed6721b2aae933f43a *R/stdzStrength.R
4593449fa568357d1556aadb973cae9b *R/tacLab.R
0fb20da607763d99b10162b1f63e4f40 *R/tacMetadata.R
7bcb4453d2342f0036db39f55e8b7ed9 *R/tacParseOutput.R
f039926221d3989508e40751f5f8d1f8 *R/utilsBuild.R
59d9582a3b7b4110b9a207176316f4ff *R/utilsCollapse.R
e7fb426a9ab9392c4d5ed5a3ee335e8e *R/utilsExtractMed.R
e7ebf24eb44870fe9f6d61a011d9ebfb *R/utilsId.R
ff700a4996e920e6e3ee8f670bea1ced *R/utilsLastDose.R
f27cf2ccad79b89f65b2d70c9a18652e *R/utilsMod.R
8b972265d22bb126e71995a77ef19164 *R/utilsParse.R
ba6ab5a98ce2f80e683e6d8676cdbcca *R/utilsPk.R
73a1565fa6a6a5f1db8da9b2494be76f *R/zeroOneTable.R
b0d74e39cf32717f963390a9b6383cee *build/vignette.rds
f848d61b8623264c8be1bd43ae42c6c2 *data/dataPheWAS.RData
e02775f6531dd72534b5164e3776cbcc *data/dataPheWASsmall.RData
d8f9ad518af36be1dc3426a126edd409 *data/lam_metadata.RData
270358ca83538e7dd26626b233f8389c *data/lam_mxr_parsed.RData
3e54df3752c73df8401804f6a4b5d075 *data/tac_lab.RData
083cecede1e7e944d269c0faecc3e5a7 *data/tac_metadata.RData
633b5f9c882e691ae0b405284501f45b *data/tac_mxr_parsed.RData
af21044a1258a35d9243c7fafcce1b88 *inst/doc/ehr_vignette_01_mxr.R
b0c4d45f41d5b7ec46802b276305ebc6 *inst/doc/ehr_vignette_01_mxr.Rmd
bc0ebabff39547dc2342b16522cb28e4 *inst/doc/ehr_vignette_01_mxr.pdf
56ce58f63606769235a0923a840002cf *inst/doc/ehr_vignette_02_str.R
073c9e675c65c73f5bef9d619075801e *inst/doc/ehr_vignette_02_str.Rmd
66a6b9b1c12f1e653121f9af159f932b *inst/doc/ehr_vignette_02_str.pdf
b184216b9952935e3e49d91b383509c7 *inst/doc/ehr_vignette_03_DoseBuilding.R
1aef05a884a26741621b261520fc1cab *inst/doc/ehr_vignette_03_DoseBuilding.Rmd
85ad6d8ae5b5ad912c0fd8b1c4ca4cb3 *inst/doc/ehr_vignette_03_DoseBuilding.pdf
7c8b4d4f17534965f02b6ed8374fc972 *inst/doc/ehr_vignette_04_Build_PK_Oral.R
bd4a962124274a8b2c9c7150d4697860 *inst/doc/ehr_vignette_04_Build_PK_Oral.Rmd
97dd0000d33d479418ec1b9755255a51 *inst/doc/ehr_vignette_04_Build_PK_Oral.pdf
525fbbfc424bcccda0fbd35729e3514b *inst/examples/lam_gs_part1.csv
495ccf655ec042e3201eb4293facad7f *inst/examples/lam_gs_part2_date.csv
17172dc8ba6fbb23544f7e331d380d21 *inst/examples/lam_gs_part2_note.csv
d3b7bb52a723380a82671c3e3d40e592 *inst/examples/lam_medxn.csv
f25821f1c171fdb2eb85b2ef651a4d91 *inst/examples/lam_mxr.csv
37bab3e75d658b968da4a54b50b74553 *inst/examples/lam_mxr_out.csv
d36c6f721de909d45b2a260d29feb15d *inst/examples/lampid1_2016-02-05_note4_1.txt
8bbaf4e029e297125c9a830bcba6de2f *inst/examples/lampid1_2016-02-05_note5_1.txt
e7088b9343dcabbe20af4b8bfa05a2dd *inst/examples/lampid2_2008-07-20_note6_1.txt
4e643415ac4719be63ac0a74db0457a4 *inst/examples/lampid2_2012-04-15_note7_1.txt
f26d0219b3e5275f97f61325a428f7ed *inst/examples/str_ex1/Concentration_DATA_simple.csv
c536db82829f549f98506ccccca29508 *inst/examples/str_ex1/Creatinine_DATA_simple.csv
3b11b12839bea6fe5067fa009f6af7ee *inst/examples/str_ex1/Demographics_DATA_simple.csv
5efb2866a6fcb0f8403223c1f3a9d479 *inst/examples/str_ex1/IVDose_DATA_simple.csv
b568aa4ee46d1939a72fe99ed1e2c852 *inst/examples/str_ex2/Albumin_DATA.csv
e87e9c6fc5a04be3d9ea661a3067d0f2 *inst/examples/str_ex2/Creatinine_DATA.csv
936c1bcaf1203b8f6ae21928771e8e5e *inst/examples/str_ex2/Demographics_DATA.csv
fa9697a472948394f2b9352add07e53b *inst/examples/str_ex2/FLOW_DATA.csv
b2ea74a0e13b9bd06dc1bf1d37548109 *inst/examples/str_ex2/MAR_DATA.csv
095197ba5b06d0a5f1bdefb9dfb866b6 *inst/examples/str_ex2/SampleConcentration_DATA.csv
305d503088c9b01ae70787493b09b345 *inst/examples/str_ex2/SampleTimes_DATA.csv
9f2a5c130ca9c5aac44157e8277cab4f *inst/examples/str_ex2/e-rx_DATA.csv
65bd7ff30cc3fa1f3f9cdb3cce410e2d *inst/examples/str_ex2/medChecked-fent.csv
40d767e2c42a47e7d3dff9d40edea2e4 *inst/examples/tac_gs_part1.csv
435ee5e438d031c3d40bdd47eec0f897 *inst/examples/tac_gs_part2_date.csv
d15e9e951dfaa1513e5866668903d70b *inst/examples/tac_gs_part2_note.csv
1077fccba7c73f85f2c356e87b366d9d *inst/examples/tac_mxr.csv
f1503fe9805256748682e9388592750f *inst/examples/tac_mxr_out.csv
4c675ab1c2a71130b4e0d039b04d33ed *inst/examples/tacpid1_2008-06-26_note1_1.txt
2bedead6a2afcc44bd75a64c54461945 *inst/examples/tacpid1_2008-06-26_note2_1.txt
46fed4bfd5092ab0ad774b6b2bdd297b *inst/examples/tacpid1_2008-12-16_note3_1.txt
4e0432c731873153d00d006aa287cb94 *inst/mxr_tune/ann_example.ann
3019b783933ae336563cf1cc47cdda01 *inst/mxr_tune/tune_note1.ann
2920440116b0ee4712d26b8c0aaa5cc6 *inst/mxr_tune/tune_note1.txt
7dad0a36693c0f33acd58d43588bc390 *inst/mxr_tune/tune_note2.ann
69c5c9fafb960e4cf37812a0b2af17ab *inst/mxr_tune/tune_note2.txt
b26ee213cd87960abcf79284436846bf *inst/mxr_tune/tune_note3.ann
0d9d5e593bd049b61ec8990cb32f8745 *inst/mxr_tune/tune_note3.txt
4f07e4f0894b838edfa026c6ab545326 *inst/tinytest/test_build.R
51abda3bf830df5eb27c14c213be523e *inst/tinytest/test_collapse.R
03b2df616fd91127807e7421e65016f6 *inst/tinytest/test_stdzEntity.R
92f364fcaa18c9329ffed8e63b5900a6 *man/EHR-package.Rd
4e6b76f4c7886b40bf5a0b795ee09da5 *man/Logistf.Rd
43614ffea0ae0e73de2e27b8833cdad7 *man/addLastDose.Rd
87714d87efea44bfdb7fc93fdacbb225 *man/analysisPheWAS.Rd
f2b4a9636c0a0cfe84f6518bf4fc354c *man/build-internal.Rd
4205d675d85da927029331e41aec97ac *man/buildDose.Rd
d8b2c199d23e91b4bd8546ef262086c9 *man/build_lastdose.Rd
6665bba9b686e351109105e473ff0df8 *man/collapse-internal.Rd
ed6ee3ee5442172d3b12cf30443389dd *man/collapseDose.Rd
84c4f9af413839400e7d74e545e2aa21 *man/dataTransformation.Rd
cc74b34c382ec79ed824a8927dfd45c8 *man/dd.Rd
6316e66423f893718ce089240adb8615 *man/dd.baseline.Rd
e8830a4da1d0022f32daba23d61c147f *man/dd.baseline.small.Rd
75ab589683ef5dcc2754557ac879f077 *man/dd.small.Rd
4377377fe384aeb75759428a9b12e076 *man/extractMed-internal.Rd
fac07209f6ecbf6f7e48a843e8d289d5 *man/extractMed.Rd
f6826931de0afea98557db6f701708bc *man/freqNum.Rd
5a13ca562f3604f4d456b4b035289120 *man/idCrosswalk.Rd
ff260158ba4969ad8ee345639fbb6601 *man/lam_metadata.Rd
0d579e557093b326f30cc0ac2825f45d *man/lam_mxr_parsed.Rd
a22562b603a8ea83a82b425f5c82312d *man/lastdose-internal.Rd
588afc86bb8e26af5a60de018d86eced *man/makeDose.Rd
04b95f5df751e2df29bb541acbf68635 *man/mod-internal.Rd
0e0472bc65e105122e0436e120ff5dd0 *man/parse-internal.Rd
e6c884e6c0d8164f20469511b87ac60c *man/parseCLAMP.Rd
8db6a4ae46d6cdff9486d3f9d4d00fe5 *man/parseMedEx.Rd
821615a12b2ea0af1f70b7edd50096dc *man/parseMedExtractR.Rd
c0036d0d6c3c3d20817bc27b7531be97 *man/parseMedXN.Rd
415045dc7ca45706f8383e6689a1ddda *man/pk-internal.Rd
32180043ea5d61b14079e541ee32e537 *man/processLastDose.Rd
96c89ff4098fab8677edca538294c267 *man/pullFakeId.Rd
4702375c6f6575373c86dd7ddc37ab12 *man/pullRealId.Rd
1886247772d9682177870a3190db2f9c *man/readTransform.Rd
f4364a677d00431fee2fa74c5a7b4d91 *man/run_Build_PK_IV.Rd
b1a3cd8eb9d60b436ea6b9e175619840 *man/run_Build_PK_Oral.Rd
e6e7b9e3cf35879799ac331d0c8c932e *man/run_Demo.Rd
f2e11e182a803970386e974d23f7c22c *man/run_DrugLevel.Rd
788c354f885831dc7d837a08ca9e8fa5 *man/run_Labs.Rd
1bf826c562bdccf9e04b8ba20dd37486 *man/run_MedStrI.Rd
09a3640905c4e5231ae6fb13048980e2 *man/run_MedStrII.Rd
b132999838a128da073c88670ea2e395 *man/stdzDose.Rd
be51bdb3cfcaedfb95a8410591277294 *man/stdzDoseChange.Rd
6ead753c912493a552a3a6c8cfdf85b0 *man/stdzDoseSchedule.Rd
c2019e06c2ca3b58e788870c11b26590 *man/stdzDuration.Rd
31c3d246d397dd4032283388102a92c2 *man/stdzFreq.Rd
7cf07a4fc037161a16d71b20eb4db043 *man/stdzRoute.Rd
1084aacbc1dc6265352cba411962caff *man/stdzStrength.Rd
3c6c01243eb37bbbc43f93ccbed8ffa9 *man/tac_lab.Rd
ae588c98c98d0992e9e5beff341b86ac *man/tac_metadata.Rd
64da63d29d012c43a69ae69e621e73a3 *man/tac_mxr_parsed.Rd
4375df58b78c4d3028f9f56cf11b6f3d *man/writeCheckData.Rd
9f6e581bad1deab892d682d86df32082 *man/zeroOneTable.Rd
b0c4d45f41d5b7ec46802b276305ebc6 *vignettes/ehr_vignette_01_mxr.Rmd
073c9e675c65c73f5bef9d619075801e *vignettes/ehr_vignette_02_str.Rmd
1aef05a884a26741621b261520fc1cab *vignettes/ehr_vignette_03_DoseBuilding.Rmd
bd4a962124274a8b2c9c7150d4697860 *vignettes/ehr_vignette_04_Build_PK_Oral.Rmd
