ca331ebdaa5e0849ad0be2b176e16f53 *DESCRIPTION
a86b599f7abfae8951bba6b8eb2c3bb9 *NAMESPACE
ce309ad5845c107f912f350e62dee7a1 *NEWS.md
cbadfc3ec5f6ac2d2e2339780283b35c *R/CharPart.R
1aa4826d034eec30115d6405a31de127 *R/ST&P_FBD.R
1f216c4cac1a3b9a92e5b6947bd6f5cd *R/ST&P_Rates.R
4c433403f12cffb0563aa6a898142995 *R/SelectionStrength.R
6a3e7c7289272312eb8e3b8e887c4f21 *R/helpers.R
0ac746907c2dce992386eee41f73072d *R/helpers_beast2.R
680b996fb9f4b6b4ae18c41a381d38b1 *R/treesWoffset.R
e880404109a684526f4ab2886aa5528d *build/vignette.rds
d19bd6cd604b35f240c6385e8a0d61d8 *data/characters.rda
e3e892b610f6a1e979ce934346c7238c *data/datalist
5665c027a34f25fb0e42a48f3509a368 *data/post_trees.rda
8b6a705fcb7b53826e6614d1bbef540b *data/posterior1p.rda
634fe79a5f7f518f497cf52c2a7b468f *data/posterior3p.rda
6bd509ba6c1ad76a4dd95eb5b640dd66 *data/rate_table_clades_means1.rda
20d998f42ea6066022af6d977d3dc42e *data/rate_table_clades_means3.rda
5ccf1c7c78b552f1cbd1c719b22270a8 *data/tree1p.rda
5609bd351412b4786a88e399e5f4e215 *data/tree3p.rda
3b4d4bf9d3ea64794eb7684d2d940dc6 *data/tree_clock1.rda
d7a381d6c61b5a69a2c9742e959d5c21 *data/tree_clock2.rda
c8cf4f7e0ac3db754896e42a655fab81 *inst/CITATION
58a51f7b47dfe1fbb92f4e8f4d928054 *inst/doc/char-part.R
10a935f54014c96d93ae780c0a22feb3 *inst/doc/char-part.Rmd
75c9c24ce9acb51651e0226466d66745 *inst/doc/char-part.html
5aef6788b2d1a63c529188c0a3820395 *inst/doc/data_treatment.R
d0beb9bb8aa54dcc2a013bf55cdae0d9 *inst/doc/data_treatment.Rmd
8fc62a3f657fd500c399b57a3f1fc936 *inst/doc/data_treatment.html
d133160a1008dbfb565ed9400394f102 *inst/doc/fbd-params.R
e05ec83dc3e7a8095f7e2911ebad8b7e *inst/doc/fbd-params.Rmd
8fbf25660ef82aa82b6bc9749db8c707 *inst/doc/fbd-params.html
53e56482464ebe34b35e1955cb423090 *inst/doc/offset_handling.R
7f4284709fb3688e1321696eb0d146d5 *inst/doc/offset_handling.Rmd
06f7c1cd40c8344e5eb0e018fe09912e *inst/doc/offset_handling.html
ad426693829c3e4b178fe51d6b295326 *inst/doc/rates-selection.R
36312d79b262eb739d930dec3659b459 *inst/doc/rates-selection.Rmd
c8518738332403cb29ef5dccc05b6b34 *inst/doc/rates-selection.html
16c14239596af4feba320c3d74d5dd90 *inst/extdata/ex_FBD_BDSKY.log
4ee125a8b93d97a16407c73f343db290 *inst/extdata/ex_FBD_SA.log
d887981451489f23b106cf7da0b3d90c *inst/extdata/ex_offset.MCC.tre
cfbd206f389deefba4d01cdd19d707a3 *inst/extdata/ex_offset.log
743be0d6115a619a463651c2dbfbf94d *inst/extdata/ex_offset.trees
592016298464084d7af99e520afbc04c *inst/extdata/tree_mb_dummy.tre
e5153775281ea873962136fc9d132598 *man/FBD_dens_plot.Rd
2eab710189180bb85b34b4bdfd1ae234 *man/FBD_normality_plot.Rd
1246270bca56ba15b9ead732eaa049c5 *man/FBD_reshape.Rd
2259e4c4e655946509b02e4f3d9d1889 *man/FBD_summary.Rd
1a52da813be024a19e131e5e26de7429 *man/FBD_tests1.Rd
85ae3ff15d7bb6b5d281e68a08a02473 *man/FBD_tests2.Rd
1efaf510c04f3c4bf4f65fdbd92e8e43 *man/characters.Rd
2decac6ce4cf100cb8d9a500ab19dc35 *man/clock_reshape.Rd
cbf72f38c7dd7e7aca8172fb7dcba999 *man/clockrate_dens_plot.Rd
3f6f47a2efa04ed989a04d2f0750955d *man/clockrate_reg_plot.Rd
9387b16709fa8dfe43e7855c25c0bac8 *man/clockrate_summary.Rd
df4954b7151c46a93c77bc8e8622770d *man/cluster_to_nexus.Rd
18296a1e18249f7d2ef8866af62deb9d *man/combine_log.Rd
9d0c3c1415f55557f9322ce345bb582d *man/drop.dummy.beast.Rd
13a46c54f9f8a6ca04022a8693245a55 *man/drop.dummy.mb.Rd
beb02acc441f3b7ba80677118d39cc3b *man/get_clockrate_table_BEAST2.Rd
41f95841e48c60168c90175a0f38b809 *man/get_clockrate_table_MrBayes.Rd
8f9ffdcaa967df537166fc7a1cd199c8 *man/get_gower_dist.Rd
8e04184f971e6415c324d41ffba3b4a1 *man/get_pwt_rates.Rd
bf87cf8d38a36f69291b8d600094d642 *man/get_sil_widths.Rd
417080159cd08631661e1bc8d751544c *man/make_clusters.Rd
3d723d7b9bf6c7fd92a4baba53b85b56 *man/offset.to.dummy.Rd
d16c298f0ea9696763115d8d0550337c *man/offset.to.dummy.metadata.Rd
d57ddc477e0eef234a4897eecfdacc95 *man/plot_treerates_sgn.Rd
563e429f9f14960db7888380174a8d84 *man/post_trees.Rd
a0fbb4f2220ca4496392cf158383bfe6 *man/posterior1p.Rd
047f0f8736db2724c27df89904912f0c *man/posterior3p.Rd
1c2252bf8a90b5de28f80ea4f0952fd2 *man/rate_table_clades_means1.Rd
ef7e717488fe5f0559454589c2a6a05f *man/rate_table_clades_means3.Rd
7f133ef6a4703c0a8e733439979130b6 *man/tree1p.Rd
84e973baee204cd969452d7fb5d37ac1 *man/tree3p.Rd
68c6c1fd9fecac42faa93341398bec8a *man/tree_clock1.Rd
f93f8b6c0702a5a599c1f4533288bfde *man/tree_clock2.Rd
8083d81b42d45cd7a2a3eef39a9b08ac *man/write.beast.treedata.Rd
035fe271390a018063126482abebe506 *man/write_partitioned_alignments.Rd
10a935f54014c96d93ae780c0a22feb3 *vignettes/char-part.Rmd
d0beb9bb8aa54dcc2a013bf55cdae0d9 *vignettes/data_treatment.Rmd
e05ec83dc3e7a8095f7e2911ebad8b7e *vignettes/fbd-params.Rmd
7f4284709fb3688e1321696eb0d146d5 *vignettes/offset_handling.Rmd
36312d79b262eb739d930dec3659b459 *vignettes/rates-selection.Rmd
d8c4be121a7d61cd494a5df95c3051d8 *vignettes/references.bib
