6f5adce57995450ab00a21ff4b5ea0a4 *DESCRIPTION
fbf79b65cb107de92f54a8c5217e9742 *NAMESPACE
8e639ad86d8aef84fcc427c1e1e219a7 *NEWS
1abe0d8e8d919931d960aadcd8d9c8b6 *R/CSEGriskfigure.R
05b473278c51a51cfc41f75916fc886b *R/CSEGtmufigure.R
8b7cc3e1376f72281033efea086d0758 *R/MARSS.R
3ba34038be8fb79aa7dda0d4d666af79 *R/MARSS_dfa.r
e326d41a2bc8879359f057630e0e8c26 *R/MARSS_marss.R
3f80be6cf767a8986e5279a9261878f4 *R/MARSS_marxss.R
fad6a58a0fa1ffc7bd7d08f7df6bc97a *R/MARSSaic.R
3c104e9c3bd19e766ac52f0a09028091 *R/MARSSapplynames.R
818f47b00a0191e1d0539cebbc12d690 *R/MARSSboot.R
60adc4e6363b9554d84708d6297f4c6c *R/MARSShatyt.r
94e659b23fb9f51ccf2abcf0685e7aa5 *R/MARSShessian.R
eff85c069828c85f1d60ebb8fbf9e35b *R/MARSSinfo.R
bfe45caf25f18d94a1e51086907cbe32 *R/MARSSinits.R
54b3abe42574c5995ea66c786999d1bb *R/MARSSinnovationsboot.R
359e5e926cfabf25295a4567a794f26d *R/MARSSkem.r
4e5f629d034e20d4c22423b05526fe36 *R/MARSSkemcheck.r
aaec1bfe9f631348236034f801e9222b *R/MARSSkf.r
14df58300bf8ff2f755eee087ba1e845 *R/MARSSkfas.r
75871fdd76205a1f05d660299b5ac352 *R/MARSSkfss.R
1edd64499394c36d5c57af66fa76b7f8 *R/MARSSmcinit.R
3fe4eab853e279fe93fd0974e7b08b7b *R/MARSSoptim.r
01d27b974c5e441eaa13dd3c5826429b *R/MARSSparamCIs.R
426ce518bdaaf0513e06dd9c56d7688d *R/MARSSsettings.R
5b1762a426ceca1e552ce22320feeb63 *R/MARSSsimulate.R
0b616b2b8678573362a63dccbcd327df *R/MARSSvectorizeparam.R
8fac8de3437941ead4f91bfcaf78187f *R/checkMARSSInputs.r
661053ccfaf2603a3477378d2cf1ed37 *R/checkModelList.r
35cb9fa0b739cdd11a20ef93607185b4 *R/coef_marssMLE.r
5262a88207aa638f2581925d12ee0de2 *R/describe_marssMODEL.R
16d0a6ba37e45355efdc568e011c04ea *R/diaghelpers.r
100ced7ee8e065ad2b6b6531048dfd51 *R/is_marssMLE.r
27bc785123f8ec1a9eb982bbb9bf1bae *R/is_marssMODEL.R
ca2f7e58bb56da635996d5feb3cc9ea4 *R/onLoad.R
f418beaa0c3772ab6f97203c4b0b4f85 *R/predict_marssMLE.r
d6d924f0b4fb1df5c77c77d51ecc2675 *R/print_marssMLE.r
0242c4f9f5451ca9e7bd864614d2d1e9 *R/print_marssMODEL.R
bcd44db057d73e13e3b255048bdc0237 *R/progressBar.R
17f9c8745129bb69a1be3604a9fb19ac *R/residuals_marssMLE.R
f8d3320d69174bedacb4048a3c3fe183 *R/summary_marss.R
14f8aaa33903c8bc4cb7a3f82ca96b7d *R/summary_marssMLE.R
25ebc6b88e6a50483900cec0f1ab7ea6 *R/toLatex_marssMODEL.R
80a46096201ffd2e4dfed735d0c794b5 *build/vignette.rds
40e919bd17df7ed8530c6bfced827ff0 *data/SalmonSurvCUI.rda
6a368bb265850d260a4ade1f5acc2ef0 *data/graywhales.rda
9687fd26d1c7e37deb713b5d15c39d84 *data/grouse.rda
c7d65bc0cf7feeb1e7966e1beacb9c95 *data/harborSeal.rda
4dbccc6fbad7f2d5e21cee4d4f9962a4 *data/harborSealWA.rda
624938a5457ce12a8a6c716ba0709b0d *data/harborSealnomiss.rda
0110004df78fb4604ef464cced89f5cc *data/isleRoyal.rda
0ccd31eb359d325c51fca61107a40d4d *data/ivesDataByWeek.rda
54d4546697857f1217aafa15f4a93557 *data/ivesDataLP.rda
b221b6199191929a3e9a7308b024dff5 *data/kestrel.rda
6209212d108143f3572bab1274230a13 *data/lakeWAplankton.rda
3ac0630c867dd992eaa9e1a3629261fe *data/loggerhead.rda
7461688b324fce41b713db0d90dbc451 *data/loggerheadNoisy.rda
7dba40d4261dae2282fce64e7a4885ee *data/okanaganRedds.rda
9e1f016e8a44722b82c4537c7a4c8bb7 *data/prairiechicken.rda
59a0eba4833c80a67f0c0eb401578cb5 *data/rockfish.rda
ff1f8311cc96d406be8e6304e775d1ed *data/wilddogs.rda
58870706c4dab590287f7e746fe6fd41 *inst/CITATION
9055af998e9d1d34d2f22a1883f11ace *inst/doc/Case_study_1.R
61b429a443181497f18055c830a5d679 *inst/doc/Case_study_2.R
0755da2f422d83b3cf13c721caf55124 *inst/doc/Case_study_3.R
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499363c0c4c7510108851cc1a9929d14 *inst/doc/Case_study_DLM.R
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b86aeec063520e440b402065c2cdeb12 *man/CSEGriskfigure.Rd
de42e0a513558b7997989f374b13f049 *man/CSEGtmufigure.Rd
c5b1163d9682acf260d3fe631a7a6261 *man/MARSS-package.Rd
de5e1426a23a4fe210bd8f1ae4eef336 *man/MARSS.Rd
4a9333034f16dbac8492a185d835192f *man/MARSS_dfa.Rd
b5f2d058aaac9da8d6dc10fdc75e1e69 *man/MARSS_marxss.Rd
69f50913227bf42b84a2a9f29ddb725a *man/MARSSaic.Rd
deb410f8100eded0c01fc1e27a02eafc *man/MARSSapplynames.Rd
dda828d1dd065d821654fafecf93ede3 *man/MARSSboot.Rd
83651b554c1017686ec18c4318a5a8df *man/MARSShatyt.Rd
a848a348411f65bb109a17a3f3eef457 *man/MARSShessian.Rd
0cda1fbd58659618f9fce975a1c383ff *man/MARSSinfo.Rd
8b4b61cc7640088009c8c4f738c4466a *man/MARSSinits.Rd
6ee74411906d5ca32206aff3590409e5 *man/MARSSinnovationsboot.Rd
6fe2eb9b9af0996182e594083318443f *man/MARSSkem.Rd
1e4476ed55175a433d95be87a120b937 *man/MARSSkemcheck.Rd
c957add88f332bd2c4991d735e467a8f *man/MARSSkf.Rd
53f05408b715bc58143c6379cae9e34b *man/MARSSmcinit.Rd
aad5efd52d87d91719672fffa190bdfe *man/MARSSoptim.Rd
578fa9eb158b76e3c56df43b708c1188 *man/MARSSparamCIs.Rd
f8a1908c762350144670d3f98669f5b1 *man/MARSSsimulate.Rd
ea584abf0c548f20eec04d885cc2cc51 *man/MARSSvectorizeparam.Rd
34b33c53c3d35fb715e20b05e8a0f317 *man/SalmonSurvCUI.Rd
82cbfbc0e47812179890c63a345e952a *man/allowed.Rd
aa0964d4ada3a3131cf6764b9501af66 *man/as_marssMODEL.Rd
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3dc719c78cbc66b0a75ad5f8554284c3 *man/checkModelList.Rd
e8c62ca35e9f28b07ea1a20746da562b *man/coef_marssMLE.Rd
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414b3e3513c57b9df84aea448e628b78 *man/harborSeal.Rd
cf5beaa8acf25b99b69f660882b733f7 *man/is_marssMLE.Rd
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1005d4680fd4451d029f36b433ab7332 *man/isleRoyal.Rd
a8517d21eaf41f10a5e2b202ca4380ca *man/loggerhead.Rd
eec12f0022d144b1f6b2dd4ce26d45fe *man/marssMLE-class.Rd
42e8aed2699ef392dd23f56526ca722e *man/marssMODEL-class.Rd
8e7e827e5b1b7e5462f7a4a88032ffc9 *man/plankton.Rd
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c5c96a3bcab1876fd51082c06af87228 *man/print_marssMODEL.Rd
d7cd3b4841ad6e035f3d8afe30c38acc *man/residuals_marssMLE.Rd
daa892a520348de4f1399bae5986338c *man/stdInnov.Rd
5d88bccf2f40536511fe224c35319336 *man/utility_functions.Rd
c5dae7f072ebb02134bcd08a782715f1 *vignettes/EMDerivation.Rnw
c5c450062463f8648c294601f0aad245 *vignettes/EMDerivation.bib
6a898b335eaa21014ba9c88069ad6841 *vignettes/Quick_Start.Rnw
991d17962a60cb2be17f3098134cfe7e *vignettes/UserGuide.Rnw
