943c90e0080229000d7f65bdab808065 *DESCRIPTION
3e079513f1519431b79fac71b1078afc *NAMESPACE
233279071596b37b57339f74b2330b17 *NEWS.md
e461bc6ba204f675788ad84029c10265 *R/PN-auxiliary.R
cbd1283e48a1e5286722d168670418ca *R/PN-epiSEIR-network-P.R
1a0cf1219b2fc1ac9559b831970cdf86 *R/PN-epiSEIR-network-T.R
a234ca7143b1ca77aec1bd9d5ae138c4 *R/PN-epiSEIR-node-P.R
56e84c8a2685b74765b95de7b4c95ed7 *R/PN-epiSEIR-node-T.R
68958ddd57d6601cfdeb2586d63cae8c *R/PN-epiSIS-network-P.R
3798633197c175b4bcef5965b032cfc7 *R/PN-epiSIS-network-T.R
86355154fbf618bb1fae075b623f8b91 *R/PN-epiSIS-node-P.R
30d7021048567167de0f4163752cfba4 *R/PN-epiSIS-node-T.R
01de0bb863fe46740b8923f9d0ac0e8b *R/PN-lifecycle-network-P.R
eb4b07a20489c5d1e494b014f626febd *R/PN-lifecycle-network-T.R
f570b8d43beaa716191384c285a82c9e *R/PN-lifecycle-node-P.R
11aa8a47a91a6d5a5ef18b861ef4dd77 *R/PN-lifecycle-node-T.R
e8992191b974c98d448bd968b1bf8004 *R/PN-matrix.R
a65efff827a2abd8856cb73c2c89a557 *R/auxiliary-analysis.R
3afda50818abd901e004e6005c40935e *R/auxiliary-internal.R
cea57a658990db2c370fadf59ad43493 *R/auxiliary-plot.R
dab6f0059e8495891460b1e4e545c548 *R/auxiliary-tracking.R
b60ae8803a8a0a25407a546eb55efdc2 *R/data.R
9009a9b0b71d1682e62abdab26e03c74 *R/equilibrium-auxiliary.R
5746d0e3b215c8711552b44f19977eb0 *R/equilibrium-epiSEIR.R
bf82d77cd3ddb656e681a4ea843c0605 *R/equilibrium-epiSIS.R
8b7956e72417952a34701a75c5222750 *R/equilibrium-lifecycle.R
244e8cc9c8dccd4a2a5303cf33bbf060 *R/hazard-auxiliary.R
4e73146a576c1b35d7e5f7fcc797c0f1 *R/hazard-functions-human.R
926edefb1f8d253b5f413580412c91ff *R/hazard-functions-mosy.R
0b58e98f541d1dfcd7be5a7376fd83f4 *R/hazard-main.R
cd764de5d5b7003967846bfc77f48e28 *R/sampling-CLE.R
14c61fa88cb74869fa34593c2d57e7b1 *R/sampling-DM.R
6ac7982ca1c9697a4be8638184791719 *R/sampling-ODE.R
fd2154833a9157ce5800b0f561dcdf20 *R/sampling-PTS.R
e1799bbeca1e7845579f8118d83a61dd *R/sampling-trajectory-CSV.R
ca91c0a7a8c66721cb79d3f92d08fa7d *R/sampling-trajectory-R.R
d06717d44dd879d68bfb8abe6d0485a1 *R/zzz.R
251af50a1f36c3524dbc4cfd253b5718 *README.md
3a8ff6486b2a78f5a60d2a4db920e593 *build/vignette.rds
a99c264bdc998d3878512a9e46b4c3c1 *data/mu_ts.rda
ee3a831550acb6a799be2694ff86e3bb *inst/doc/advanced_topics.R
739d81e6adc4745e35a4d222aed9d5fd *inst/doc/advanced_topics.Rmd
c049c6232d6cbfc396dd1a2a4d921a82 *inst/doc/advanced_topics.html
bec381cf9dcf84b92ea3d3855c6f5e35 *inst/doc/epi-SEIR.R
f0e59f212c6bd6522d29bfea7641a916 *inst/doc/epi-SEIR.Rmd
a1d0bc9f752e337e07f4f6a4f201aafc *inst/doc/epi-SEIR.html
3abf8d511c5860aa9f9a10fa204e3493 *inst/doc/epi-network.R
17d0be8b32cb40dcf6b0e7d29e586444 *inst/doc/epi-network.Rmd
5c2cf577204431244b0cdcb89a38311b *inst/doc/epi-network.html
de6a59fe2c1acf2b89ae9e730aa20252 *inst/doc/epi-node.R
8823e194f840f0283fcf8ad28915ddc8 *inst/doc/epi-node.Rmd
2f10e585152167cf7269388092edc05b *inst/doc/epi-node.html
3ae17a2442ac12ab104cb20e983b84cf *inst/doc/inhomogeneous.R
51f48d95ef099675aefe7888041ec791 *inst/doc/inhomogeneous.Rmd
245f3ab034baa485894a312a4770f19b *inst/doc/inhomogeneous.html
7dd4392fc995c03ae466d6d789b194a4 *inst/doc/lifecycle-network.R
7a7632f6a0f90e082e193a6cadaf8eb1 *inst/doc/lifecycle-network.Rmd
8ff744cbd1569152fd01de4998468581 *inst/doc/lifecycle-network.html
73891d8a9acd79d8a8be3d244d61f2c1 *inst/doc/lifecycle-node.R
344387492863421148c075b7a14afe5a *inst/doc/lifecycle-node.Rmd
cbd591adc60ec838b1c71beaedfedd37 *inst/doc/lifecycle-node.html
45f636f951bc87f05fcc26efa547066a *inst/doc/output-storage.R
f1f0e38eac89b96b3ea6aa1b5629dca2 *inst/doc/output-storage.Rmd
41746f1543de9ab1796593ac486864e5 *inst/doc/output-storage.html
6ce082330694276fc13e400e368c1dd1 *man/base_MQ.Rd
512cf50a29a3326a1a691462e9629307 *man/base_MUH.Rd
00458df7183bac0f3a420e286b850522 *man/base_aquatic_geno.Rd
fd193f554e64176018a6c988d970113f *man/base_aquatic_stage.Rd
e29684d48b66cacaa3a2dc15393c0b44 *man/base_erlang.Rd
b4f9db3fa9b8e6579c4c0f84b50b6427 *man/base_erlang_F.Rd
8418000f9db67edc729ea699d6873ca5 *man/base_gen.Rd
80e77d4b193279209141487a31f8dab9 *man/base_gen_FE.Rd
4d1611d09df7c1c216727841023b13db *man/base_sum_F.Rd
5867c3dd591dab6dff6e638d730461b9 *man/base_summarize_humans.Rd
30b5a7ab5c214e77bbb38a096f3eba11 *man/calc_move_rate.Rd
6b19391998d621dac571b74f2a089010 *man/equilibrium_SEI_SEIR.Rd
e1d241c88fae106454d2213bc9915f63 *man/equilibrium_SEI_SIS.Rd
4566c99b2fe00d4b9ff055f184d5247c *man/equilibrium_lifeycle.Rd
d1b415b07b8f1afd1609fb67a172fc6f *man/make_Q_SEI.Rd
52d159a74e5bb3fb312e8c7949e67705 *man/movement_prob2rate.Rd
cbbd9b81407e830499117bde4091dbf9 *man/mu_ts.Rd
bf823708474671cee7e2fe69975430eb *man/sim_trajectory_CSV.Rd
1b8a713caef039b2822fc865bce7d95d *man/sim_trajectory_R.Rd
05bb848881e8ead0f8337e587a1fec09 *man/sim_trajectory_base_CSV.Rd
7b9da4ea4b2165d4a2e10b370ba5087d *man/sim_trajectory_base_R.Rd
4b40683a593866e0a0d34d7fba73b6fb *man/solve_muAqua.Rd
bab55f279f3ad7ebfb8b46450704cf02 *man/split_aggregate_CSV.Rd
38087c2eb231b566e49f4466e600a901 *man/spn_P_epiSEIR_network.Rd
e5fd282e323c5c2b5483acbf18f887a5 *man/spn_P_epiSEIR_node.Rd
988201caa7ec619b123e875884bda52d *man/spn_P_epiSIS_network.Rd
3e604a907de5e10174e82cfe54f3f667 *man/spn_P_epiSIS_node.Rd
669477b909ccd8ae5bcaa0e71d7e4840 *man/spn_P_lifecycle_network.Rd
9697a7a1f5854a6d089be88bda702826 *man/spn_P_lifecycle_node.Rd
cc2a16314f28b3beaea34a955191b5d6 *man/spn_Post.Rd
593b6f110c20e2cb08a164adffe10e56 *man/spn_Pre.Rd
90eb1722ff73c4d781884bad62a73681 *man/spn_S.Rd
1e6c3cf234f4cc83dd7ff8382979ce4f *man/spn_T_epiSEIR_network.Rd
8f87b4b6143944a6f4631e108a3745de *man/spn_T_epiSEIR_node.Rd
84087b6a89dce7cc772b08adcd9004a2 *man/spn_T_epiSIS_network.Rd
acbb691876fa554e3608758c8e17d9e4 *man/spn_T_epiSIS_node.Rd
80a4019e50fb10807e0a895add45d63d *man/spn_T_lifecycle_network.Rd
f8ee8c1445217fb937c6bb8a3e0d97e4 *man/spn_T_lifecycle_node.Rd
55b897375881ba35ec39d843691539c0 *man/spn_hazards.Rd
2292b273c33571147c972a0d6e86759e *man/step_CLE.Rd
b4c6fa4bf838e4c1f709d9e9ec01ea33 *man/step_DM.Rd
bc3665dc082e78d98b132fa00a3344a1 *man/step_ODE.Rd
0fea33736f8ba2d041323cafb4c1a3b5 *man/step_PTS.Rd
f1bdf3e1d6e581adfc06c9eb78c5a4e7 *man/summarize_eggs_geno.Rd
317301ec40740b3566fe9d0f58c4777d *man/summarize_eggs_stage.Rd
1f6f744b98fc77120be34d1350ff72b0 *man/summarize_females.Rd
ae69a41612ee5445f4b73edbd788a7be *man/summarize_females_epi.Rd
c5f6c5265993124265fd409d16b84bbc *man/summarize_humans_epiSEIR.Rd
8bca9ac86a9d00294bf6441d30ef445d *man/summarize_humans_epiSIS.Rd
6382480c90ff1ccb8ae7d2cd6b06d5d1 *man/summarize_larvae_geno.Rd
347668283b5f30236e2134377164446e *man/summarize_larvae_stage.Rd
3c81d94ad05905a433eeae473d24604f *man/summarize_males.Rd
a7558c20eae362a7f36419b6a23ad157 *man/summarize_pupae_geno.Rd
5afa25340cf4e6d23b30ca3d0955dcd7 *man/summarize_pupae_stage.Rd
83363d0219167a84db79628e7baad6f9 *man/summarize_stats_CSV.Rd
7bf825679bbb1afd0f9f3a658a112a01 *man/track_hinf.Rd
739d81e6adc4745e35a4d222aed9d5fd *vignettes/advanced_topics.Rmd
f0e59f212c6bd6522d29bfea7641a916 *vignettes/epi-SEIR.Rmd
17d0be8b32cb40dcf6b0e7d29e586444 *vignettes/epi-network.Rmd
8823e194f840f0283fcf8ad28915ddc8 *vignettes/epi-node.Rmd
51f48d95ef099675aefe7888041ec791 *vignettes/inhomogeneous.Rmd
7a7632f6a0f90e082e193a6cadaf8eb1 *vignettes/lifecycle-network.Rmd
344387492863421148c075b7a14afe5a *vignettes/lifecycle-node.Rmd
f1f0e38eac89b96b3ea6aa1b5629dca2 *vignettes/output-storage.Rmd
