492bbe07a31293b771249b644d16f7cd *DESCRIPTION
4c4d6386d9ff73540b8d84c517f74ebd *LICENSE
b503743218b0d352e6674f35a3b1b56b *NAMESPACE
fafd989de3d07be0f1ddd98b38193cff *R/convert_bam_to_rle.R
30f09c7e4cba4615d5fa60b4854d4586 *R/convert_rle_to_df.R
7fb44bbbc89a41d36151271b4b1ab633 *R/create_high_nucleotide_content.R
f71e414de4e9e7c78bec832734c1e91b *R/create_mappability_profile.R
b45296868c8a8d4e89cbe1f9415cbc45 *R/data.R
5d2146c786934f4fac6e9a1503bc3001 *R/globals.R
8deda70709439cbaf7ff331fa1e904c7 *R/plot_cov.R
6718770b2399ca6ea0cb9053f0d940a2 *R/predict_iimi.R
7619fc68ca98d819e3e78de1742dd6e9 *R/train_iimi.R
67b0d18898b03a20d3edc218c326af36 *build/vignette.rds
2eb042b4571cb0b70d7d352f4afdbc3a *data/example_cov.rda
a43e60dda3367d573bcfa993abc6ee0e *data/example_diag.rda
0fb2f49b41bf42bf515d23337326e32a *data/nucleotide_info.rda
46e233612284ac1b7869c00f3e7c07c7 *data/trained_en.rda
ceeeb230e109c36180199b58a31745f7 *data/trained_rf.rda
0c7493d4f691b9e457dffef25229f5ac *data/trained_xgb.rda
7adeee9185f69972cc22502aed95a5d5 *data/unreliable_regions.rda
ef1d8fe975afbdcb7d8cf141eea1b4a4 *inst/REFERENCES/reference.bib
8fc88cfbb25ee8e876247595620c7c7c *inst/doc/package_vignette.R
3b2671139b367aad93cdd523e103f56d *inst/doc/package_vignette.Rmd
788bef961f432b17552fb52691b423d5 *inst/doc/package_vignette.html
79d412df573f1378d97a809bc55533c8 *man/convert_bam_to_rle.Rd
026f9efc39bdf39cbba506b5ab55899c *man/convert_rle_to_df.Rd
3a5fa1e1a76d6ae1bdf84a204047c5cc *man/create_high_nucleotide_content.Rd
0616cf2d09af7e70813b3643219bc1c8 *man/create_mappability_profile.Rd
3cbc326573a5494035c8ab007157b931 *man/example_cov.Rd
9f52f460edb01dbcc4470527c581ad26 *man/example_diag.Rd
b4a5d15d60d83744eb1b6467cb69351e *man/nucleotide_info.Rd
63f6c94c28a4f7fb75b57d2e0b6c361a *man/plot_cov.Rd
9bc02be12d96e81bc29199a9e9e90ca6 *man/predict_iimi.Rd
a9251d6a52cdeb95e1c36f29f9d9f3b5 *man/train_iimi.Rd
0be8cd3a3260b223ab502670af06c06c *man/trained_en.Rd
4c32db2acd8e09ef59c253e9698e31b9 *man/trained_rf.Rd
a442abf0ba066f3ea79106c39ad8e792 *man/trained_xgb.Rd
4f0a01a65ba8127bfd7bf7f749cc6a75 *man/unreliable_regions.Rd
3b2671139b367aad93cdd523e103f56d *vignettes/package_vignette.Rmd
