79e0d0e30f67ef7485d72c4046bdb2ae *DESCRIPTION
69e847e5f0885855a5ce3841bc85b570 *NAMESPACE
963c39f30a17612a224febd99924ab25 *NEWS.md
0bba1682d55f5c2fe11d18e99c3bef1c *R/Idist.R
7d04223e6f20a9554042ae454eb2bd06 *R/KerAdjustPD.R
58350d79f5534b65a94d291226ed6b1f *R/KerCori.R
3b38e81fadc0e96a0c908c973beb16c9 *R/KerDateTicker.R
3eeeb0e30cee8b9b0510e427d4cdc99c *R/KerIncidCheck.R
97361e8d33fdf99ead1d254ee80cb5ae *R/KerLikelihood.R
0d57b6bf8162eede0bc32709646d75eb *R/KerMCMC.R
7799b0364ce386564af715500e7240b5 *R/KerPtheta.R
b0a276816638a7d89685d14d66e74a09 *R/KerWT.R
96ea266cdb72971148c7d60c825c83fb *R/RcppExports.R
6c8fb9b5379b58a281526eb566d25c73 *R/Rmodelpriors.R
3162122a98fba4adf765ce83d129f5af *R/S3_Idist_plot.R
5f000dc01de9ce50bc5765a596aa2dc9 *R/S3_Rt_plot.R
273e2820502cdd809f2399b33df63513 *R/S3_Rt_summary.R
2e9de45f9b82c9a5279a152a827a00a9 *R/S3_Rtnow_plot.R
5ac13907435ca1c555272e1dd7d9eac8 *R/S3_incubestim_plot.R
552ad9cd7f8178e3555331a6ba7b6f61 *R/S3_nowcast_plot.R
20f89565e3216eb7ed325810b9d5d8dc *R/cov19incidence2022.R
7cb4ac1e0afcf7cab3e20d652c92b67d *R/cov19mort2021.R
c0d2645494ff23b7c37e704bfbe55ed2 *R/cppsource.R
2c89ea2f7a6ce836cd4bb70dd3b52b08 *R/epicurve.R
785d74101f7076aa659c1988c0cc0325 *R/epilps.R
c338b8f50f7cd6340f57ac4aa7c96959 *R/episim.R
636517d0f5f031fbe480e1ff4330603d *R/eruptions.R
5b1f7a581ee26ec7c89c12d59cccf7e6 *R/estimIncub.R
986e072392eeb602e5f2f3357ef30c93 *R/estimR.R
86daa11aca5656265265540fdf3f9992 *R/estimRmcmc.R
403a2c964b26262a91345ca61eb70421 *R/histosmooth.R
2e4307dc2c51cc50040aa5cbeea8dae9 *R/incubsim.R
a49e81f67bb5edfafb8f0e5a454c5067 *R/influenza2009.R
b14e31d8bc99e4fa4218438584e7a3c9 *R/nowcasting.R
f5160722d51498e687859cabce7f0d14 *R/nowcastingR.R
cea7ddf72583d1b2c24c2387ea7892b1 *R/perfRestim.R
deee37420cdd5190110acef30933b743 *R/sars2003.R
2c4703dab2f839a9c1ea6adc7da3c3ff *R/zika2015.R
1a91a2f444b3fa54701d46567080b9b1 *README.md
5074590c55d92e7d2ab0361de07fa38f *build/vignette.rds
65d68ec20f0e246c969eb651eeb2c871 *data/cov19incidence2022.rda
3ac93363ac0c66108d10e02cc48a04be *data/cov19mort2021.rda
b5188aeb1ad4ba8d35a41521755314f5 *data/eruptions.rda
d43d651295bbe279c2b0ca2f0462dfe3 *data/influenza2009.rda
117b4d0cd0018689e67ae0be3dd23dfe *data/sars2003.rda
b225d10b0016225a02803a1601335c55 *data/zika2015.rda
27930d089ca1d77297e34cfc23e70157 *inst/CITATION
c08c34d3a1cbca0ca4f246a32b744b2c *inst/COPYRIGHTS
138ce04d5a391d18b704dec7d049ab13 *inst/doc/Reproduction-number.R
bb513815ef38bf19a2cb5ba85369a4d0 *inst/doc/Reproduction-number.Rmd
c17b58e81e0801947c96cb17557d8105 *inst/doc/Reproduction-number.html
07da29d35a60c1577409614ebfc3d9e4 *man/Idist.Rd
e7cb6b63b8a90cf9788c9a8f6d5aba5b *man/Rmodelpriors.Rd
e4577c5002a21db11ffceefa770d82d8 *man/cov19incidence2022.Rd
63367e5f3dd5d6182da4dfe6a9632c56 *man/cov19mort2021.Rd
68db79069dd3161ac998921250259329 *man/epicurve.Rd
436318268572b934179db0bf59cb5193 *man/episim.Rd
a6ba61bdecc978c8cd51e90e8e38fcd8 *man/eruptions.Rd
4fdf6e1b2d9d3ffadbc622008a9ae034 *man/estimIncub.Rd
6e42e7ab39a81f2db3984d929670c793 *man/estimR.Rd
8d2e67436eb5237523e60a886d72334f *man/estimRmcmc.Rd
48620bc12cd3cc768d4db48bfdc41a16 *man/histosmooth.Rd
4c6900ca2271d8fc81343d0e3f41edb3 *man/incubsim.Rd
17f41d86db43f33d94944cd98f018c60 *man/influenza2009.Rd
93a5a185711cbf8e3de2c4a11a5bc2a3 *man/nowcasting.Rd
89660a190b721715335e1542d3a99b40 *man/nowcastingR.Rd
eb7b494aadfe4ef3d5053aa396f51d1c *man/perfRestim.Rd
41d9be92c03f96a741d75ffcdefbba36 *man/plot.Idist.Rd
93e18cd2e86d1fe227a5213d43de735a *man/plot.Rt.Rd
4b01a0b8d4addc6f45e4849eb275f4a8 *man/plot.Rtnow.Rd
4f62e1c47363baeda3e045ed1b9042d1 *man/plot.incubestim.Rd
2838c5356837f22fcebcdf6b23e38ad9 *man/plot.nowcasted.Rd
6fdbb803433bcaa8c91760a158136007 *man/sars2003.Rd
c240974010a81b5ff9e745fbcae4cd4e *man/summary.Rt.Rd
37fa39a584618bfe2e9b258ad6098212 *man/zika2015.Rd
e86d391bc005979a9501d28e7ed8ee0a *src/KerLaplace.cpp
3d401bc3faafabb48bb519e6dfd0a905 *src/KerLaplaceIncub.cpp
97fbcdffa40fc72b811162567ec832a9 *src/KerLaplaceNowcast.cpp
3c99308b8212d30f6dbef5a02ad47419 *src/KerMVN.cpp
b1aa3b30e82a7ad12c5f534cc2c8e881 *src/KerRpostmap.cpp
3c70ae24fddae0ee39bef7d585a941b3 *src/KerRpostmcmc.cpp
8a9433fc532e9d11183f5f9dfb60352a *src/KercubicBspline.cpp
324026280ad4a2aec433fea68d40c09c *src/Kerhyperoptim.cpp
c89d6b95d18721894ab45341d0fbc7a6 *src/Makevars
c89d6b95d18721894ab45341d0fbc7a6 *src/Makevars.win
19b71e9b58fa2b404c03e9d69bf8c12d *src/RcppExports.cpp
0943f38d17693a4d3ca5b83691838a10 *vignettes/EpiLPS-Arch.png
28abb6ad583ddffe79027e72e7f18892 *vignettes/EpiLPS-Chart.png
bb513815ef38bf19a2cb5ba85369a4d0 *vignettes/Reproduction-number.Rmd
