399c60bef622cffb52b344b96bc31946 *DESCRIPTION
9d275edb3533cda64a9f9c0432171bd2 *NAMESPACE
b2a42de9319ee3253f952f85dedb1de2 *R/fitPoly.r
98cfc5f2f47a9f47d78d6a4e0bf1448f *R/fitPolyTools.R
ca16503eff2ad139fa344b88d18cb000 *README.md
5960a11fddf771da956bd607cbe8eeac *build/vignette.rds
72457a7a35be211e70279397e85cd335 *data/XYdat.RData
641a59bd358e89d98c6cacbd027e7961 *data/datalist
051fabf14054d299151f7696e12aba3f *data/fitPoly_data.RData
d61302c2cc8ffb7d3aeb63666ec1435f *data/scores.RData
58789e1f06a8f8566861009fc7cdf449 *inst/doc/Data_import_and_preparation.R
4118d3a33926810b7014ba9badf67ffd *inst/doc/Data_import_and_preparation.Rmd
44ea4d546216cfaff6fd2e63bd7c1c61 *inst/doc/Data_import_and_preparation.html
2a60aa8b7a652fa4147900b7bf3d6d8f *inst/doc/Segregation_analysis_of_dosage_scores.R
a75893868ed2130d876adb62ed95d538 *inst/doc/Segregation_analysis_of_dosage_scores.Rmd
43ef11e3d88ba4ed4a6f612ca0ce0a13 *inst/doc/Segregation_analysis_of_dosage_scores.html
0bc74642e77542bb55a8afdfd381e30d *inst/extdata/AX_sampletable.csv
394d08117a7c8f507c8d45556e7720f4 *inst/extdata/AxiomGT1.summary.txt
4bbb5240dd67f4de1c938ded6804ee7b *inst/extdata/CsvAnnotationFile.v1.txt
3101c6ec54ac9cafe88af9149b420430 *inst/extdata/FullDataTable.txt
d90c27be51339f0a974813d8c21da375 *man/CodomMarker.Rd
8a3d7fad4b7acb36a7827de3cd38293b *man/F1Dosages2Matrix.Rd
693af06984b92caf5c294b8ec7a41633 *man/XY_plot.Rd
3afc92219988e6ad5ee02c62e06fe4df *man/XYdat.Rd
1d27b20d17713de7d15cb8d402da2ebc *man/calcRstats.Rd
497b07447ca8a969ed92444617e1d068 *man/calcSegtypeInfo.Rd
fc77c1a6269c0ae8001a3b3bf78af5e2 *man/checkF1.Rd
5c78b545cb273a9c3130bc453b359f3e *man/checkFilename.Rd
dcfd6812c86afbc60cdee04e78010a60 *man/combineFiles.Rd
a2d30bd67ac051c9a1e1859c140f37ea *man/compareProbes.Rd
52759c5c851dd1c495d1c7312be68cd8 *man/concatbatch.Rd
1f514da89bd575e1f2258d1fe312f577 *man/convertStartmeans.Rd
71be4c2555d231256ff478dbe73579e2 *man/correctDosages.Rd
410c158a738bcc1bf825e2e771414ac1 *man/drawXYplots.Rd
c7fe2366e3f9ee1e26340cb495993028 *man/expandUnknownParents.Rd
0644d47a8590cbee4891c9aeac4499b7 *man/fitMarkers.Rd
1c3407b8fa38345dc1b7a4471daeb770 *man/fitOneMarker.Rd
7cc8b1e14d5a84f3f480ed6adcd75484 *man/fitPoly.Rd
dcb408c91bc03207c56e7b008e3a6d12 *man/fitPolyTools.Rd
a8b5df297804f0e69970d67769a0aa98 *man/fitPoly_data.Rd
ea2c57dc724f848b6efc7b8eaf24b772 *man/get.genocol.Rd
4794c4517ba017200c4a55136a6b6ff4 *man/getBatchFiles.Rd
a2e4a0b4aeda297c82d563fc18268f0f *man/leftstr.Rd
5dc449979fd8098af8061b30c11d13d8 *man/listSegtypes.Rd
9e9e93dd9be027cee134c20190a13433 *man/makeFitPolyFiles.Rd
166ab4811cefa6e11d841fbb1beed360 *man/readAxiomSummary.Rd
c45d489fa33f325b24a7b722ad5e70b4 *man/readDatfile.Rd
b82d8d82112bf1241ba31e8c1d4ce8c4 *man/readFullDataTable.Rd
8cf515103bdabcffec8a82d7522a92c9 *man/removeRedundant.Rd
592846037e786fcffcaef7067d4d1923 *man/rightstr.Rd
3cd06976c65aa4cb55dfda4f5a60ad6f *man/samplestats.Rd
2168e4ad9d9b273aff0bc7bce2d262bf *man/saveMarkerModels.Rd
50f9d195f3ca34deb20c015c3986fd3f *man/scores.Rd
05956dae5bf5db0200c0e5959258b4ce *man/scores2wide.Rd
24d74aa93dfff11900cec36caae2b572 *man/segtypeInfoSummary.Rd
7f11fa30edc7af066d228627a616f767 *man/selMarkers_byR.Rd
c31e3ac5b9226aaa4b7540f103955208 *man/selMarkers_qall.Rd
1db5216dee4d98164a3facfd4a653105 *man/selSegtypeInfo.Rd
843b692e10fb7ea3adae8c8121efcc22 *man/splitNrenameSamples.Rd
7ffb26ab7bbb135b6f5bcb609349e6f2 *man/writeDatfile.Rd
035d665297a778104d63a6f83f36106e *man/writeDosagefile.Rd
b23d01428c2e44ab04ed9e2e2c828904 *tests/testdata/SNP5815.RData
e160325e44baa4ee98b5b9b0152c041a *tests/testdata/smalldat.RData
fab438387806fbc646e1bb06df81a310 *tests/testthat/test_1_CodomMarker.R
3e6056b304c3a3a1d5145813c5de8ce6 *tests/testthat/test_2_fitOneMarker.R
714b766ed457910d64c221231a3630f1 *tests/testthat/test_3_saveMarkerModels.R
4118d3a33926810b7014ba9badf67ffd *vignettes/Data_import_and_preparation.Rmd
a75893868ed2130d876adb62ed95d538 *vignettes/Segregation_analysis_of_dosage_scores.Rmd
e759a00a622b7612f571df65d28b7930 *vignettes/check_R_levels_DO_NOT_DELETE.png
16e6bd4e4d200e6b6b0213fc1d87515f *vignettes/check_qall_levels_DO_NOT_DELETE.png
