f07a7b3b4bb313347988d910b253382b *DESCRIPTION
2d1d9d791ae3c6de3ae61fe60e58ac8d *NAMESPACE
744307f42e535568e385daa3868e18a4 *NEWS
39636112309b05ace74b2a346cc16ab4 *R/F234.R
7c248f8d14c2821eafc92145df9b4168 *R/Fst.R
42d2bbbcbe427c612ee7a26d31a310c0 *R/IO.R
d7360518154e5df0c8fc650e1a6c9111 *R/MMD.R
6ea2fd29cfe6178ece04bbf02ca98f74 *R/R2.test.R
25b355d00c015a5f61e5237a6dc3e5c3 *R/VCFloci.R
2b0c30239a2f8886578350f3a7011281 *R/allelicrichness.R
6e3581d41764251270319faaec519ea7 *R/amova.R
b47a0a0202bc6799451127eff83358ee *R/conversion.R
44228cc6ad4ced80347b64815a2baa4c *R/dist.asd.R
ac0129c39a21ac189f30d41afc0cdf28 *R/geo.R
b5ef4f883c6ff7a4988d5281c649b123 *R/haplotype.R
d91264f0be988e5c084db65520755051 *R/heterozygosity.R
7511be46ac5c58a664cbd6515e745f96 *R/hw.test.R
951d9c6b234a37702c156c4af6a744f0 *R/mjn.R
e22823d33ca3ee546246500b021ce007 *R/nuc.div.R
1e186f46fb1e5fc5b24119f8997d5f7f *R/options_themes_haploNet.R
5a6758d63c43b99092ee75d53761ea3c *R/plot.loci.R
9618de40a0bc87dc124a0c49e38bf012 *R/plotNetMDS.R
215db9edbdc18ae1ad5dee3869815afa *R/rr.test.R
6109855be0e66abe79e2e06f962be413 *R/site.spectrum.R
0ed51b7e358e7286abd0acf30b0fb1af *R/stairway.R
31b753ca34f3b8421f9653f821cafb05 *R/summary.loci.R
6888ed20ba859e38c49644353adc8465 *R/sw.R
698cc005c6cf41147c833d2de50e7209 *R/tajima.test.R
4f2b2edaf9a2d427383d323cf9b0ee89 *R/theta.R
de6abcd474d1415490fab95eb5ae535f *R/zzz.R
76e123f5dcc8dee07678412adc0a2a84 *build/partial.rdb
867aee14f0b0351eefc858d10ccb0a87 *build/vignette.rds
28851c59cc5535f917122a87b4808461 *data/jaguar.rda
b09598cfe26790462fb611f53dcd4fde *inst/CITATION
68d5ac6c6b6c2c3093b7b388c3421b47 *inst/doc/PlotHaploNet.R
24534c308a488d4ad077ce588fc60b53 *inst/doc/PlotHaploNet.Rnw
c7138f08c482f8d4addff6449a2322f0 *inst/doc/PlotHaploNet.pdf
51dc6e783c0218518e0529ba6aa59b85 *inst/doc/ReadingFiles.R
53370248d2d7f828e3dd977a287f4eaa *inst/doc/ReadingFiles.Rnw
ebbe14d7c147d9b548582ba821744e8c *inst/doc/ReadingFiles.pdf
d579898d655f09bd98fd0d9d0e486a48 *man/F234.Rd
a7e89ba17650beb4a9f6152bf9ada29b *man/Fst.Rd
bc5dd68a2223cc35a808965454ec6518 *man/LD.Rd
fef287eac0eec0cd845a5bd6c11b63bc *man/LDscan.Rd
c5267f54d84ba08395e8999a588e57e5 *man/MMD.Rd
cbc53cd9777e7548f36d399ea3d52e17 *man/R2.test.Rd
39e62644628068c8c860202e71b71a7c *man/VCFloci.Rd
738957e217dfb1383f0699f18d935b63 *man/all.equal.haploNet.Rd
5b4cd1ebb6c576434418980b34d84a1d *man/alleles2loci.Rd
af62a558d921c9793784dcfc7e858f35 *man/allelicrichness.Rd
0dce65de441d2c63c64556abb85fb2cc *man/amova.Rd
b68d5272f35efcb1185c24a242c202bf *man/bind.loci.Rd
e0599199dcf46d3a69e224316bd92742 *man/by.loci.Rd
faa99af57b9554aaacf1ad01024491ec *man/conversion.Rd
91d1777187cd26ae8de5a8da5e8a264c *man/cophenetic.haploNet.Rd
a15c082d56caaa1ab93d9bdf2a57dd84 *man/diffHaplo.Rd
fd4d4be68850d0a2d547934c82fcc1ac *man/dist.asd.Rd
db82a7c62f3b2bffc1f2b6fa063aa1cf *man/dist.hamming.Rd
6bf8595c60f60f41f285d5a60c590179 *man/edit.loci.Rd
994ee5aec7fc56b2cc91853badaae4d3 *man/geoTrans.Rd
36b80830f430ef080b8c79b8b9c0defc *man/geod.Rd
5387676dd80a59e2042836dd6825b06b *man/hap.div.Rd
8f37055beb58c52d8f59697a091c99df *man/haploFreq.Rd
c2d8fffa5c2307a8031af5e945f6991a *man/haploNet.Rd
7f98470d6be363ccd48aae0451e65304 *man/haplotype.Rd
143fdf553d40c4a77a0450a60275d534 *man/haplotype.loci.Rd
b97cd2d2f9056e89f1e3ac843c24c372 *man/heterozygosity.Rd
d429f8890335f7e362783739c59ed66d *man/hw.test.Rd
042fed1eff6508c67e81dc030f610dcd *man/jaguar.Rd
9cff9caf54470bd3b43976f6e0d6b7c1 *man/mjn.Rd
cd57be503306b4c5f2305843dec751e6 *man/mst.Rd
548f41296eadae50db66b1184fcdfd76 *man/mutations.Rd
b8019b39c7b87b76fd2dad54a72114ca *man/na.omit.loci.Rd
3b87ea408feeaf59512d68e2b742837c *man/nuc.div.Rd
f56fe9bdebed15b8808cb53df1c5f5dc *man/options_themes_haploNet.Rd
d5d958e8cf0a402d2c4379f67d5f80ec *man/pegas-package.Rd
f1138e498b9101ba93a48be19940dc8f *man/plotNetMDS.Rd
a478276e37d71d6017bef891e8e56d5e *man/read.gtx.Rd
d7a4733492b12e2c15702025fe1be725 *man/read.loci.Rd
f75f1a39bff0f49a250e8ca7f8914eda *man/read.vcf.Rd
9bcfb2439a5a883fcf9e236eabdba891 *man/replot.Rd
651f6ccff60df1161dedebb9a404dda2 *man/rr.test.Rd
bbec29e8bc3d0760f4f259a3abc1043d *man/site.spectrum.Rd
2d1a79bddf00f04ed2337b1cdef1a25a *man/stairway.Rd
72de3bbcd9d8db4e54854861c136f53e *man/subset.haplotype.Rd
488184bf9c344b6dd3a8ec3f4a8263a8 *man/summary.loci.Rd
79b167b2fe67b8e3639b08bb76694489 *man/sw.Rd
1fba696d393e38e6925252c166284ce6 *man/tajima.test.Rd
f1a6ea2bf2169cc5846ed356944020a2 *man/theta.h.Rd
aa7aeadb72990f457212669f28aa2562 *man/theta.k.Rd
4303018e4c53ee482f4d8e970adcd313 *man/theta.msat.Rd
c0cf2787afa6c12ee3041ee072ce3763 *man/theta.s.Rd
be86569a182a335821927d3719fa9a96 *man/theta.tree.Rd
be922d3dc74df5102eb01fdf3648ff8a *man/utilities.Rd
799f5a475b1415b09464f3dca0a56b0c *man/write.loci.Rd
2a6f9e9e044a78154d3cfda5936d6f48 *src/Makevars
3d63eae7d0a738b307148fb8ab72ae15 *src/mst.c
60f6181ef614656de714f6b3a58d7996 *src/pegas.c
f5fbde4f4dddd28ee5db87d314568a6f *src/readVCFbin.c
ca521b4823423ed4af9bcdbcaab3a635 *src/summary_loci_pegas.c
24534c308a488d4ad077ce588fc60b53 *vignettes/PlotHaploNet.Rnw
53370248d2d7f828e3dd977a287f4eaa *vignettes/ReadingFiles.Rnw
31968dd62224a9e5ac7f9969af87f9f0 *vignettes/ape.sty
23a94ea02f8007d6c7689ddded7f2a0b *vignettes/pegas.bib
84278f2d0229fb87dda308b1551cb2a3 *vignettes/tata
2964da1756e3a2c2bd02c7235cb2fa2f *vignettes/titi
619c909499f3a837b8c62484905aa7bc *vignettes/toto
e59fd7d2d1e692488df7701530016ec0 *vignettes/tutu
958cceda906e9b37a685a4340d8d0b88 *vignettes/tyty
