f1a6139f79563a0e415c2ea639f5f759 *DESCRIPTION
9d21e9a3cf6247ad224fef385c639d0c *NAMESPACE
c5ebf65176888fea0182eda18c0ef4c4 *R/get.better.R
b355057294d5cc9cdf5ae5b9fcfd6a61 *R/get.inits.R
1da1f384de503ce1014026e5e464ebc2 *R/get.tauB.R
b0aee60c54e51777785713d97f38b6ee *R/get.tausB.R
89f0c5fdc1dbf53002d15059c3394618 *R/input.checks.A.R
d1b7fa558b29ebd79f1f064255276044 *R/input.checks.X.R
60917a0209734a59fa808f7ef699ccfb *R/ll.aRC.R
694f15a5eb47ae2ba39d2561edc58221 *R/ll.aRC.X.R
fc2ff20450a3c2b507e0c625916e1c57 *R/ll.aRC.theta.A.R
37ff7ee5ab0bd8d15b7820dbcdef3594 *R/ll.aRC.theta.A1.R
dff28df2a634e36705803b9422712c04 *R/ll.aRC.theta.A2.R
f7704e72791b903dd4708d48d9b441cf *R/ll.aRC.theta.X.R
6810191e5426ed4fc96c6b61c69ddd75 *R/ll.jRCI.A.R
d82572bf8032ffbecf985f21375eb1f0 *R/ll.jRCI.A.cons.R
c0d351501553d4c7419ab3103b636767 *R/ll.jRCI.A.cons1.R
3c7cf2bb403cbefa653df65e99070c9c *R/ll.jRCI.A.cons2.R
81468073ed0ba61397660a4a00805553 *R/ll.jRCI.A1.R
a8be366cb3c31cbaece8fb5dae04556c *R/ll.jRCI.A2.R
6b920f1cd84c83b05bf994023cdc5917 *R/ll.jRCI.X.R
a2c5ea6a4665958c342642239425c845 *R/ll.jRCI.ase.b0.A.R
e6ce5bd1ceea52e04d14cb2e321c7fab *R/ll.jRCI.ase.b0.A1.R
e5b01ea561f301ef54ce82fb86b5722e *R/ll.jRCI.ase.b0.A2.R
e62207a88b2a38f2fb1472415f48cb8f *R/ll.jRCI.ase.b0.X.R
4fbf240785136d18f8abff79ac6d345b *R/ll.jRCI.b0.A.R
a539210261d37ac6d4de4a1292424754 *R/ll.jRCI.b0.A1.R
8e873615906f8dbe124270d260a40cbb *R/ll.jRCI.b0.A2.R
96dc7172f9a3dce761f4530f6b60f95b *R/ll.jRCI.b0.X.R
4f6fdbaf42c14300e92af74b0d261c75 *R/ll.jRCI.b1.A.R
67b9a6d9fe28459e8fae02117c2322f7 *R/ll.jRCI.b1.A1.R
75014c6420a678b8eba88d2215e0f0aa *R/ll.jRCI.b1.A2.R
0b1455e1e62ad4498dc86abfe931d355 *R/ll.jRCI.b1.X.R
74d8509a6596cd33249486a612489fab *R/ll.jRCI.sex.A.R
234a3fc7a351905d8331c2d5ad00428e *R/ll.jRCI.sex.X.R
6a9a037227a67aec7bb179406340b49b *R/ll.jRCI.sex.b0.A.R
e9411b70f2d18bc25590daab4f4cc8b3 *R/ll.jRCI.sex.b0.X.R
45dd877086de5244e825353840169d61 *R/ll.jRCI.sex.b1.A.R
e16482732eaca40f078fd4418527dad3 *R/ll.jRCI.trec.ase.A.R
4c83d5542f9522b65aa14cdb2608f10c *R/ll.jRCI.trec.ase.A1.R
43e5e136435ae7ad03191aee1433ee77 *R/ll.jRCI.trec.ase.A2.R
0d4be6153ccde06d7c98824167b88d08 *R/ll.jRCI.trec.ase.X.R
ea20d46237ca8308b5b6b6bcc7e5b8f6 *R/ll.tRCI.A.R
5c87d96998383ea1af9855169f8d25f4 *R/ll.tRCI.X.R
f3883a4805852cfca5e765b7d78546f0 *R/ll.tRCI.iphi.A.R
a4be9882fda674a40ca5c07c983b7ff3 *R/ll.tRCI.iphi.X.R
024cd4622fea358155e83c860c32eb04 *R/ll.toRCI.A.R
a37fe7f6c51135c87b40b41138aaca18 *R/ll.toRCI.X.R
e48809db22dcc603b48488b56fede37c *R/ll.toRCI.b0.A.R
4a4476def466c5da04ee74cd8b359b0b *R/ll.toRCI.b0.A1.R
a0ff994fbfd76d6eac6bc5d1bff2afce *R/ll.toRCI.b0.A2.R
afa4c9ea007c15a9004bd68331c6fbb4 *R/ll.toRCI.b0.X.R
ffbd4b41ba59d5aca448b3e6257c4760 *R/ll.toRCI.iphi.A.R
afe1c19100de8dcd0d1967b0cd197b14 *R/ll.toRCI.iphi.X.R
2d6321db1499fa3d61c8510212662be5 *R/ll.toRCI.sex.A.R
24e54e74d0a2bb345b82111a7e0d9e63 *R/ll.toRCI.sex.X.R
fa7fecee161b27f5e1445a2d719e4145 *R/ll.toRCI.sex.b0.A.R
26a32275ede61e7f595c5697cb2e2ce2 *R/ll.toRCI.sex.b0.X.R
ba9b0e2fa1e427952c5527900daf635e *R/logBB.R
b6768bdefb8cafd17b17611e958e8d0e *R/loglikNB.R
ca89ab6b3631102d7396fc89e8ab5d0d *R/loglikNB0.R
276a634fe14c4065af0ea9226bace69c *R/loglikNB1.R
53277f0c387fda4e63780e704f37f7a5 *R/loglikNB2.R
2f8b1782294071bf6d96b38fa9ed0bb0 *R/nLogLik.R
c17033115acc3a3bb434ffb30aeefae6 *R/nLogLik.trec.A.R
75fe89e58824dd2452ccf39d03f05e55 *R/nLogLik.trec.X.R
2f588770ed6413eaa6c1719ae8d57402 *R/nLogLik.trecase.A.R
c2fb475184d02a488542a402c5a68d45 *R/nLogLik.trecase.X.R
3667ec2df77bd32c7dbaaa23fe09368d *R/proc.trec.A.R
ac817d428405d07f3a2b0bc472c1c53c *R/proc.trec.X.R
67e805f84757e7c9c36e78356203d613 *R/proc.trecase.A.R
35a3d7bf081eab7ec84c31736659ac0e *R/proc.trecase.X.R
a936f5af5c606b1f8321853da0c0ebea *R/process.R
dee5dd04a6bc7366c2d529a66e45dae0 *R/readCounts.R
60e340481e50d5dbe4db6e00e4645b04 *R/simRX.R
b789f5f4e8a13d99a3ddd01ccc299999 *R/test.R
d33beb0b33bd7906fae758c48748500f *R/trec.b0.A.R
0739d8d5423908b80c997b6d0cd72c90 *R/trec.b0.X.R
4e45079f51ee89a46f8b861e34470a3d *R/trec.b1.A.R
85ef441cea9545c955774505c57b494a *R/trec.b1.X.R
2f7980c50dc5037eb82b4017081e68c2 *R/trec.dev.X.R
de3ce99251485b436c60af49c5e19903 *R/trec.dom.A.R
bf601ef5c8445693f9b71f9762091cbc *R/trec.dom.X.R
133d4b11895c962c9ba2e882a62b3651 *R/trec.full.A.R
a2c5ef9261f97380718e27e15a107c9d *R/trec.full.X.R
86d4abde81a9e4a9b1011da316976c4c *R/trec.sex.A.R
fab9e8c7cc43784b7cadebbba0ac3686 *R/trec.sex.X.R
c5081a033d498fba617b169b8886d151 *R/trec.sex.b0.A.R
a546ccbcc9f3f525c4d7841e24c9ffb4 *R/trec.sex.b0.X.R
10b7c4451f5ed84290203fe9c493954e *R/trec.sex.b1.A.R
6c4af6e0bf2eccf516d6eb77077c8003 *R/trec.sex.dom.A.R
f157f331fc22948f61fcba9406589089 *R/trecase.ase.b0.A.R
87ac25b6c1efc1a283b8ce3618f01e1b *R/trecase.ase.b0.X.R
43edd99b93213138e9facb939af68985 *R/trecase.b0.A.R
4d767cdf09093f06551fe6eaa8ef5444 *R/trecase.b0.X.R
e6d4ee9cfcfa82a69817ee5eef0df734 *R/trecase.b1.A.R
5c799c7704c3178c829474cd0cd11a0b *R/trecase.b1.X.R
8c41850daaa37d335d9dfe7186375bbd *R/trecase.dev.X.R
df9b357af1dac162a0707ed6d7874ab7 *R/trecase.dom.A.R
c8b66423b4c0d97753cc8bf8e6f59489 *R/trecase.dom.X.R
1d0b0cac1e796405b7499acd5e3df25a *R/trecase.full.A.R
d92abe1785186d95ae9a763d47c8e50d *R/trecase.full.A.cons.R
6248fd29e4bd3c3a0a8cf33e7d395b46 *R/trecase.full.X.R
1395e7ccbcbe8eb009393c6dbf42101f *R/trecase.sex.A.R
5ebfafd6280e28325f7f4e8199634370 *R/trecase.sex.X.R
53040482b8aae93e25bab8c8ca606480 *R/trecase.sex.b0.A.R
8c99eebd9493f19ae30ae5b295d15b59 *R/trecase.sex.b0.X.R
9102720390586de0fde7dddb7e0e8f5a *R/trecase.sex.b1.A.R
352beeb1d36a9e18928cffadadcbb577 *R/trecase.sex.dom.A.R
8e76b5bb3bb6499d9786d31a44ccbffd *R/trecase.trec.ase.A.R
d7e91df90f75af1338e978aa4752812c *R/trecase.trec.ase.X.R
259ace719d43b6cf4c1e939e97c930f5 *build/vignette.rds
96347b8a23c1ab35ebe8859515bbd359 *data/dt.A.rda
78a11f72a0df61548c724a27e44a780f *data/dt.X.rda
33d632325cde33356ba680c28e95feb0 *inst/doc/rxSeq.R
1e6b5d18c2af1a0e3f563ed6ea1aaacf *inst/doc/rxSeq.Rnw
a9bc423ae844240f2a9bdf47d95e3020 *inst/doc/rxSeq.pdf
105bebc6440fbf5487ee811b7a87a3e2 *man/data.A.Rd
5d483ec2eba9bd7c06d41d1e516240a6 *man/data.X.Rd
e77ee9e4c9d5cf0cfa4ae68c083537d3 *man/get.tausB.Rd
6ddf716c7fb59ec26f4ff19bc4f4a31f *man/nLogLik.Rd
284ecbbfb36cb6747de44350508c0efe *man/process.Rd
ebad0a4a8d87ac42e7f9872b168f48b8 *man/rcA.Rd
c1b6918e45d556e8d25b2cdbedc43fca *man/rcX.Rd
1c1c6ecc961446c2dbbf9c7d4b0cfbc2 *man/readCounts.Rd
c7f29eee29b310e24ae7da6c2b014b46 *man/simRX.Rd
cf61bb6cfdd0b29c6b3f81935f087b6b *man/trecase.A.out.Rd
1c5047488a933903882e780d16d196f7 *man/trecase.X.out.Rd
1e6b5d18c2af1a0e3f563ed6ea1aaacf *vignettes/rxSeq.Rnw
