a2500adc89049e70b95f7ec0f70c4f69 *DESCRIPTION
2da5c36b7008b74096e586d23fcca666 *NAMESPACE
9f4e2ef4d24efceda0f7c0ed7bbf2703 *NEWS
edcac2c013a49976a8fcb7c0ad53353a *R/000.R
fee43549336884b50b78f8e574092888 *R/999.NonDocumentedObjects.R
266ca59377a184b82689c21b86db01a5 *R/999.package.R
2387f2dfb1935e8310b3dfb6eb04ad9c *R/CalMaTeCalibration.R
6f2a63fe3c235b8cae0bb83576fac46d *R/calmateByThetaAB.R
f2979261f1c59cacae501698c3b90c25 *R/calmateByTotalAndFracB.R
637a4dcb6af8645afc7405bd037949f3 *R/fitCalMaTe.R
7c76a0006b20eba3eca17785fed987d5 *R/fitCalMaTeCNprobes.R
a8e654af1089ac87ff28c205a02c7311 *R/fitCalMaTeInternal.R
15d1000c24b42b5558f197aa3f36ea17 *R/fitCalMaTeMedians.R
26cf991bf7c8e6c811840fb54007b468 *R/fitCalMaTeV1.R
40867c784df5096eed2b9d02fc7ea011 *R/fitCalMaTeV2.R
b323eed6d90e76646afc970f59bb082a *R/thetaAB2TotalAndFracB.R
d7b654a823041cf3ce4d9100e772be5d *R/truncateFracB.R
b62e214516744b10f00b10e0e697ff07 *R/truncateThetaAB.R
5d70959a9e051a5666c0524ad97022d9 *R/utils.R
37e02caff1501ca7ffb6e309036a4aaa *R/zzz.R
d17cda8febc52943a0b71541d9a027b1 *README.md
3833ca5a34c2fb9298cd19fe02049cd5 *inst/CITATION
decf91eed74c84917e111db6af46deb4 *inst/WORDLIST
c547539d720033d8a8a8cd8674332bdb *inst/exData/myASCNData.Rbin
f446511a78e2bd112d76ab938176d32e *inst/exData/oneSNPdata,2x40.Rbin
2f951fe505af54acff1886da3e848ac0 *inst/exData/thetaAB,100x2x40.Rbin
8de42b4b06784122a7a9e51f564f0f2c *inst/testScripts/publications/CalMaTe/000.README.txt
f947ea874b6d52d84cff0debcba85c26 *inst/testScripts/publications/CalMaTe/A01.TCGA,CalMaTe.R
6913c0d6c1c4e77dded0c1c9c932783d *inst/testScripts/publications/CalMaTe/A02.TCGA,CalMaTe,plots.R
c0342380535670cb94c181708d993509 *inst/testScripts/publications/CalMaTe/B01.GSE12702,ASCRMAv2.R
3f5f179afe057a4659e3ef7b809500b3 *inst/testScripts/publications/CalMaTe/B02.GSE12702,CalMaTe.R
f14b22a96e63183aaca6bd17223ada23 *inst/testScripts/publications/CalMaTe/Z01.plots,byChromosome.R
912cd0456874e944e224e13cd8b889e0 *inst/testScripts/publications/CalMaTe/Z02.plots,segments.R
21e8f05df626bb40cbd7f13348808d38 *inst/testScripts/publications/CalMaTe/Z03.plots,byUnits.R
cade6a53b96b0ff764e14a6c89703c60 *inst/testScripts/system/chipTypes/Mapping10K_Xba142/20120206a,CRMAv2.R
ac95e8da89363caad36e150a33516b8b *inst/testScripts/system/chipTypes/Mapping10K_Xba142/20120206b,CalMaTe.R
6284d2a60e4e42a6134f4b3956ea5894 *inst/testScripts/system/chipTypes/Mapping250K_Nsp,Sty/20100518a,CRMAv2.R
3aacf39a0d017b498cc7d3ca8ad16602 *inst/testScripts/system/chipTypes/Mapping250K_Nsp,Sty/20100518b,CalMaTe.R
c463972857d06e8f662487888e77f5c7 *inst/testScripts/system/chipTypes/Mapping250K_Nsp,Sty/20100620,CalMaTe.R
84436210d78960ed3e17cd90231afdb8 *inst/testScripts/widgets/CalMaTe/001.include.R
4909731b66965afc6d950d6dfd6c20dc *inst/testScripts/widgets/CalMaTe/A01.TCGA,CalMaTe.R
776a5b5206bffc7a44644b6db455ca62 *inst/testScripts/widgets/CalMaTe/Z02.plots,segments.R
42b3845cde877a1e37a288db11a0e72f *man/CalMaTeCalibration.Rd
0b6ec3c427a309b4611f66ea6792a9fc *man/Non-documented_objects.Rd
a20057391133c8efa8e28a6ccb0897b7 *man/calmate-package.Rd
8ce82c0d466ddfa6f1870bc9ea29de33 *man/calmateByThetaAB.array.Rd
f7658b0480160525a6a9c6bc70bb1ac4 *man/calmateByTotalAndFracB.array.Rd
8693f59742d84d183f1fc7b5bbf08774 *man/fitCalMaTe.matrix.Rd
061ef6c5f58a059c3e1d0311c89f31bc *man/fitCalMaTeCNprobes.matrix.Rd
122b5dbd38f730966a38f6d97ad7bac3 *man/fitCalMaTeInternal.Rd
0730fa89f51da65af0de041bae18e892 *man/thetaAB2TotalAndFracB.array.Rd
1ed468598116ef3fd744f686cf3bbddd *tests/calmateByThetaAB.R
ff0ca7e759412ad7b97dd59d726332b1 *tests/calmateByTotalAndFracB.R
bfee075e1a8d30a641012c892319d7d7 *tests/fitCalMaTe.R
15bd204614841347047ba0cfbcd05237 *tests/fitCalMaTeMedians.R
0a9539d238e008df3b5a33e344747c65 *tests/testScriptCalMaTe1.R
7906e412836abe999da3af5eb3cc4657 *tests/thetaAB2TotalAndFracB.R
