CRAN Package Check Results for Package simPH

Last updated on 2026-02-04 07:50:31 CET.

Flavor Version Tinstall Tcheck Ttotal Status Flags
r-devel-linux-x86_64-debian-clang 1.3.14 15.07 144.29 159.36 OK
r-devel-linux-x86_64-debian-gcc 1.3.14 9.94 89.55 99.49 ERROR
r-devel-linux-x86_64-fedora-clang 1.3.14 24.00 190.79 214.79 ERROR
r-devel-linux-x86_64-fedora-gcc 1.3.14 24.00 183.13 207.13 ERROR
r-devel-windows-x86_64 1.3.14 16.00 145.00 161.00 OK
r-patched-linux-x86_64 1.3.14 13.08 130.17 143.25 OK
r-release-linux-x86_64 1.3.14 14.19 130.07 144.26 OK
r-release-macos-arm64 1.3.14 OK
r-release-macos-x86_64 1.3.14 8.00 101.00 109.00 OK
r-release-windows-x86_64 1.3.14 32.00 141.00 173.00 OK
r-oldrel-macos-arm64 1.3.14 OK
r-oldrel-macos-x86_64 1.3.14 8.00 88.00 96.00 OK
r-oldrel-windows-x86_64 1.3.14 23.00 176.00 199.00 OK

Check Details

Version: 1.3.14
Check: examples
Result: ERROR Running examples in ‘simPH-Ex.R’ failed The error most likely occurred in: > base::assign(".ptime", proc.time(), pos = "CheckExEnv") > ### Name: MinMaxLines > ### Title: Transform the simulation object to include only the min and max > ### of the constricted intervals, as well as the lower and upper bounds > ### of the middle 50 percent of the constricted intervals > ### Aliases: MinMaxLines > ### Keywords: internals > > ### ** Examples > > # Load Carpenter (2002) data > data("CarpenterFdaData") > > # Load survival package > library(survival) > > # Run basic model > M1 <- coxph(Surv(acttime, censor) ~ prevgenx + lethal + + deathrt1 + acutediz + hosp01 + hhosleng + + mandiz01 + femdiz01 + peddiz01 + orphdum + + vandavg3 + wpnoavg3 + condavg3 + orderent + + stafcder, data = CarpenterFdaData) > > # Simulate Hazard Ratios > Sim1 <- coxsimLinear(M1, b = "stafcder", + Xj = c(1237, 1600), + Xl = c(1000, 1000), + qi = "Hazard Ratio", + spin = TRUE, ci = 0.99) > > # Find summary statistics of the constricted interval > Sum <- MinMaxLines(Sim1, clean = TRUE) Error: ! `group_by_()` was deprecated in dplyr 0.7.0 and is now defunct. ℹ Please use `group_by()` instead. ℹ See vignette('programming') for more help Backtrace: ▆ 1. └─simPH::MinMaxLines(Sim1, clean = TRUE) 2. └─dplyr::group_by_(df, .dots = byVars) 3. └─dplyr:::lazy_defunct("group_by") 4. └─lifecycle::deprecate_stop(...) 5. └─lifecycle:::deprecate_stop0(msg) 6. └─rlang::cnd_signal(...) Execution halted Flavor: r-devel-linux-x86_64-debian-gcc

Version: 1.3.14
Check: examples
Result: ERROR Running examples in ‘simPH-Ex.R’ failed The error most likely occurred in: > ### Name: MinMaxLines > ### Title: Transform the simulation object to include only the min and max > ### of the constricted intervals, as well as the lower and upper bounds > ### of the middle 50 percent of the constricted intervals > ### Aliases: MinMaxLines > ### Keywords: internals > > ### ** Examples > > # Load Carpenter (2002) data > data("CarpenterFdaData") > > # Load survival package > library(survival) > > # Run basic model > M1 <- coxph(Surv(acttime, censor) ~ prevgenx + lethal + + deathrt1 + acutediz + hosp01 + hhosleng + + mandiz01 + femdiz01 + peddiz01 + orphdum + + vandavg3 + wpnoavg3 + condavg3 + orderent + + stafcder, data = CarpenterFdaData) > > # Simulate Hazard Ratios > Sim1 <- coxsimLinear(M1, b = "stafcder", + Xj = c(1237, 1600), + Xl = c(1000, 1000), + qi = "Hazard Ratio", + spin = TRUE, ci = 0.99) > > # Find summary statistics of the constricted interval > Sum <- MinMaxLines(Sim1, clean = TRUE) Error: ! `group_by_()` was deprecated in dplyr 0.7.0 and is now defunct. ℹ Please use `group_by()` instead. ℹ See vignette('programming') for more help Backtrace: ▆ 1. └─simPH::MinMaxLines(Sim1, clean = TRUE) 2. └─dplyr::group_by_(df, .dots = byVars) 3. └─dplyr:::lazy_defunct("group_by") 4. └─lifecycle::deprecate_stop(...) 5. └─lifecycle:::deprecate_stop0(msg) 6. └─rlang::cnd_signal(...) Execution halted Flavors: r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc