Depends: R (>= 3.5.0), shiny, golem
Imports: bsplus, dplyr (>= 1.0.0), ggplot2, magrittr, maxLik, mixtools,
msm, pdftools, rhandsontable, rlang (>= 0.4.0), readr,
shinydashboard, shinyWidgets (>= 0.5.0), tidyr (>= 1.0.0),
config, cli, openxlsx, MASS, gridExtra, rmarkdown
Suggests: testthat (>= 3.0.0), covr, knitr, kableExtra, markdown,
pander, tinytex, xtable

Suggests: minpack.lm, knitr, ggplot2, tinytest

Imports: bmp (>= 0.3), spatstat.geom (>= 2.4-0)

Suggests: knitr, rmarkdown, tidyverse (>= 1.3.0)

Suggests: knitr, rmarkdown, ggplot2, testthat(>= 2.0.0)

Depends: R (>= 3.5.0)
Imports: parallel, tiff, stats, grDevices, utils, EBImage, httr
Suggests: knitr, rmarkdown, abind, fs, R.rsp

Imports: rentrez, xml2, DBI, RMySQL, glue, memoise

Depends: R (>= 4.1.0)
Imports: WGCNA, mlr3, CMplot, ggsci, ROCR, caret, ggplot2, ggpubr,
viridis, ggthemes, ggstatsplot, htmlwidgets, mlr3verse,
parallel, uwot, webshot, wordcloud2,ggforce, igraph, ggnetwork

Depends: R (>= 3.1.1)
Imports: biomaRt, Biostrings, curl, tibble, jsonlite, data.table (>=
1.9.4), dplyr (>= 0.3.0), readr (>= 1.4.0), downloader (>=
0.3), RCurl (>= 1.95-4.5), XML (>= 3.98-1.1), httr (>= 0.6.1),
stringr (>= 0.6.2), purrr, R.utils, philentropy, withr, fs
Suggests: knitr (>= 1.6), rmarkdown (>= 0.3.3), devtools (>= 1.6.1),
testthat, seqinr, magrittr

Depends: R(>= 3.6)
Imports: minpack.lm, jsonlite, methods, proj4, graphics, stats, utils,
data.table (>= 1.9.8), rappdirs, sf, terra, ggplot2
Suggests: knitr, rmarkdown, prettydoc, testthat, vdiffr, curl, geodata,
httr2, pkgdown, dplyr

Depends: R (>= 4.1.0)
Imports: agricolae, askpass, cowplot, curl, emmeans, ggplot2, lattice,
multcompView, pracma, rlang (>= 1.0.0), scales, stringi, xml2
Suggests: covr, crayon, knitr, mockery, openxlsx, rmarkdown, testthat,
vdiffr, withr
Enhances: asreml, ARTool, lme4, nlme, sommer

Depends: R (>= 4.1)
Imports: stats, utils, methods, terra (>= 1.6-33), sp, reshape,
reshape2, abind, foreach, ggplot2, gbm (>= 2.1.3), rpart, MASS,
pROC (>= 1.15.0), PresenceAbsence, dplyr, rlang, scales
Suggests: Hmisc, gam, mgcv, earth, maxnet, mda, nnet, randomForest,
xgboost (>= 3.1.3.1), cito, torch, car, caret, dismo, ENMeval,
doParallel, raster, ggpubr, testthat, knitr, markdown,
rmarkdown, tidyterra, ggtext, patchwork, kableExtra, DT,
R.utils, paletteer, viridis