Depends: R (>= 4.1)
Imports: collections, dplyr, stringr, R6, tibble, tidyr
Suggests: testthat, DBI, RSQLite, ggplot2

Imports: dplyr, EnvStats, ggplot2, graphics, grid, gridExtra, MASS,
methods, patchwork, plotly, R6, RColorBrewer, Rsolnp, scales,
stats, tibble, tidyr, utils

Imports: numbers, polynom, shiny, stringdist, stats, utils, methods

Imports: asd, cubature, data.table, doParallel, foreach, ggplot2,
multcomp, multxpert, parallel, survival
Suggests: rmarkdown, knitr, testthat (>= 3.0.0)

Imports: matrixStats, rstudioapi, plotrix, raster, sp

Imports: cli, dplyr, httr2, pbapply, purrr, rappdirs, retry, rlang,
stringr, tidyr, utils, withr

Imports: config, dplyr, DT, here, htmlwidgets, httr, jsonlite,
magrittr, pins, R6, shiny, shinyjs, shinyWidgets, tibble,
tidyr, yaml, shinyalert, utils
Suggests: knitr, rmarkdown, testthat (>= 3.0.0)

Depends: R (>= 3.5.0)
Imports: coop, compiler, cluster, FateID, FNN, fpc, ggplot2, grDevices,
harmony, ica, igraph, irlba, leiden, locfit, methods, MASS,
Matrix, matrixStats, parallel, pheatmap, princurve, quadprog,
randomForest, runner, Rcpp, RColorBrewer, Rtsne, umap, vegan
LinkingTo: Rcpp (>= 0.11.0)
Suggests: batchelor, DESeq2, knitr, rmarkdown, SingleCellExperiment,
slingshot, SummarizedExperiment

Depends: R (>= 3.5)
Imports: methods, plotwidgets, terra, sf, Rcpp, comat
LinkingTo: Rcpp, comat (>= 0.9.0), RcppArmadillo
Suggests: dplyr, pbapply, testthat (>= 2.1.0), knitr, rmarkdown, covr,
raster

Depends: R (>= 4.0)
Imports: Rcpp, jsonlite, ks, brotli, shiny, shinyFiles, shinyjs,
htmlwidgets, ggplot2 (>= 3.0.0), htmltools, rmarchingcubes,
shape, ellipsis, MASS, magrittr, igraph, dplyr, vctrs, rlang
LinkingTo: Rcpp, RcppArmadillo, RcppProgress, RcppEnsmallen, rapidjsonr
Suggests: testthat, r3js, knitr, rmarkdown, rstudioapi, plotly,
geometry, readxl, stringr, tibble, tidyr, base64enc, lifecycle,
MCMCpack, spelling

Imports: rjags, MCMCpack, ggplot2, reshape2, rstan, stats, utils,
ggpubr, patchwork, bayesplot, doSNOW, foreach, snow,
parallelly, dplyr
Suggests: knitr, rmarkdown, testthat (>= 3.0.0), BH, glmnet