Depends: combinat, gdata, gtools, MASS, mvtnorm

Depends: R (>= 4.2.0), nlme
Imports: exactextractr, terra, sf, sfnetworks, igraph, dplyr,
tidygraph, spdep

Depends: R (>= 3.5.0)
Imports: htmlwidgets, fontawesome, magrittr, dplyr, tidyr, rlang
Suggests: knitr, rmarkdown, shiny, biomaRt, pwalign, Biostrings,
testthat (>= 3.0.0)

Depends: R (>= 3.5.0), doParallel, parallel, foreach
Imports: ggplot2, stats, matrixcalc, reshape2, rmutil, VaRES, VGAM,
EnvStats, GLDEX, GeneralizedHyperbolic, actuar, extraDistr,
gamlss.dist, sgt, skewt, sn, ssdtools, stabledist

Depends: R (>= 4.0.0), stats, genieclust

Imports: Rcpp, stats, utils, quitefastmst

Imports: readr (>= 2.0.0), tibble, dplyr, Rcpp
LinkingTo: Rcpp
Suggests: testthat, knitr, rmarkdown, BEDMatrix, snpStats, lobstr

Depends: R (>= 3.2.0)
Imports: curl, dplyr, httr, purrr, rvest, stringr, tibble, xml2
Suggests: knitr, rmarkdown, testthat (>= 2.1.0), covr

Imports: kinship2, methods, bootstrap, Matrix, lattice, quadprog,
foreach, parallel, doParallel

Depends: R (>= 3.2.0), ggplot2, foreach, stats
Imports: distr, manipulate, doParallel, parallel, tcltk

Depends: R (>= 3.0)
Imports: S4Vectors, BiocGenerics, GenomicRanges, IRanges, R.utils,
RUnit

Imports: leaflet, shiny, shinyjs, knitr, DT, shinycssloaders, purrr,
dplyr, magrittr, tidyr, ggplot2, tibble, forcats, readr,
rmarkdown, rio, maps, shinyWidgets, rlang

Depends: R (>= 2.10)
Imports: ggplot2, ggridges, hierfstat, Rcpp, RcppParallel, rlang,
stringr, tibble, vcfR
LinkingTo: Rcpp, RcppArmadillo, RcppParallel
Suggests: dplyr, junctions, knitr, magrittr, rmarkdown, testit,
testthat, pbapply

Imports: data.table, magrittr, reshape, parallel

Depends: R (>= 3.5.0)
Imports: kaos, Biostrings, stats, entropy, seqinr

Imports: Rsamtools, GenomicRanges, foreach, doParallel, parallel,
missForest, IRanges
Suggests: knitr, rmarkdown, testthat (>= 3.0.0), withr

Imports: Matrix, mvtnorm, bbmle, cubature, stats, utils

Depends: R(>= 2.10.0), SKAT, Matrix, MASS, seqminer, data.table

Depends: R (>= 3.5.0), shinyBS
Imports: cowplot, doParallel, dplyr, DT, foreach, ggplot2, htmltools,
parallel, processx, rlang, Rmixmod, shiny, shinythemes, tidyr