Solves the individual bioenergetic balance for different aquaculture sea fish (Sea Bream and Sea Bass; Brigolin et al., 2014 <doi:10.3354/aei00093>) and shellfish (Mussel and Clam; Brigolin et al., 2009 <doi:10.1016/j.ecss.2009.01.029>; Solidoro et al., 2000 <doi:10.3354/meps199137>). Allows for spatialized model runs and population simulations.

Provide function for work with 'AcademyOcean API'
    <https://academyocean.com/api>.

Provides a flexible framework for implementing hierarchical access 
    control in 'shiny' applications. Features include user permission management 
    through a two-tier system of access panels and units, pluggable 'shiny' 
    module for administrative interfaces, and support for multiple storage 
    backends (local, 'AWS S3', 'Posit Connect'). The system enables fine-grained
    control over application features, with built-in audit trails and user 
    management capabilities. Integrates seamlessly with 'Posit Connect's 
    authentication system.

Application of 'RaceID' allows inference of cell types and prediction of lineage trees by the 'StemID2' algorithm (Herman, J.S., Sagar, Grun D. (2018) <DOI:10.1038/nmeth.4662>). 'VarID2' is part of this package and allows quantification of biological gene expression noise at single-cell resolution (Rosales-Alvarez, R.E., Rettkowski, J., Herman, J.S., Dumbovic, G., Cabezas-Wallscheid, N., Grun, D. (2023) <DOI:10.1186/s13059-023-02974-1>).

Implements a computational framework for a pattern-based, 
    zoneless analysis, and visualization of (ethno)racial topography 
    (Dmowska, Stepinski, and Nowosad (2020) <doi:10.1016/j.apgeog.2020.102239>).
    It is a reimagined
    approach for analyzing residential segregation and racial diversity based on 
    the concept of 'landscape’ used in the domain of landscape ecology.

Contains functions useful for reading in Licor 6800 files,
    correcting and analyzing rapid A/Ci response (RACiR) data. Requires some
    user interaction to adjust the calibration (empty chamber) data file to 
    a useable range. Calibration uses a 1st to 5th order polynomial as 
    suggested in Stinziano et al. (2017) <doi:10.1111/pce.12911>.
    Data can be processed individually or batch processed for all files paired
    with a given calibration file. RACiR is a trademark of LI-COR Biosciences,
    and used with permission.