Provides tools for specifying and evaluating standard and truncated probability distributions, with support for log-space computation and joint distribution specification. It enables Bayesian computation for cognition models and includes utilities for density calculation, sampling, and visualisation, facilitating prior distribution specification and model assessment in hierarchical Bayesian frameworks.

Uses 'ggplot2' to visualise either (a) a single DNA/RNA sequence split across multiple lines, (b) multiple DNA/RNA sequences, each occupying a whole line, or (c) base modifications such as DNA methylation called by modified bases models in Dorado or Guppy. Functions starting with visualise_<something>() are the main plotting functions, and functions starting with extract_<something>() are key helper functions for reading files and reformatting data. Source code is available at <https://github.com/ejade42/ggDNAvis> and a full non-expert user guide is available at <https://ejade42.github.io/ggDNAvis/>.

Generate commonly used plots in the field of design of experiments using 'ggplot2'.
  'ggDoE' currently supports the following plots: alias matrix, box cox transformation, boxplots, lambda plot,
  regression diagnostic plots, half normal plots, main and interaction effect plots for factorial designs,
  contour plots for response surface methodology, Pareto plot, and two dimensional projections of a latin hypercube design.

A data visualization design that provides comparison between 
    two (Double) data sources (usually on a par with each other) on one 
    reformed heatmap, while inheriting 'ggplot2' features.

Create biplots for GGE (genotype plus
    genotype-by-environment) and GGB (genotype plus
    genotype-by-block-of-environments) models.  See Laffont et al. (2013)
    <doi:10.2135/cropsci2013.03.0178>.

Provides a series of aliases to commonly used but difficult 
    to remember 'ggplot2' sequences.

Genotype plus genotype-by-environment (GGE) biplots rendered using 'ggplot2'. Provides a command line interface to all of the functionality contained within the archived package 'GGEBiplotGUI'.